Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN1P07384 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN1P07384 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN1P07384 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN1P07384 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPN1P07384 PTCHD3P3-201ENST00000403073 906 ntBASIC16.34■□□□□ 0.21
CAPN1P07384 CRYGEP-201ENST00000412192 528 ntBASIC16.34■□□□□ 0.21
CAPN1P07384 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.34■□□□□ 0.21
CAPN1P07384 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.34■□□□□ 0.21
CAPN1P07384 DNAJB3-201ENST00000446806 729 ntBASIC16.34■□□□□ 0.21
CAPN1P07384 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPN1P07384 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.34■□□□□ 0.21
CAPN1P07384 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPN1P07384 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN1P07384 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.34■□□□□ 0.21
CAPN1P07384 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.34■□□□□ 0.21
CAPN1P07384 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.34■□□□□ 0.21
CAPN1P07384 AC013467.2-201ENST00000605472 835 ntBASIC16.34■□□□□ 0.21
CAPN1P07384 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CAPN1P07384 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CAPN1P07384 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
CAPN1P07384 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN1P07384 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPN1P07384 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN1P07384 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN1P07384 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN1P07384 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPN1P07384 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN1P07384 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CAPN1P07384 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPN1P07384 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPN1P07384 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPN1P07384 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN1P07384 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CAPN1P07384 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CAPN1P07384 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CAPN1P07384 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CAPN1P07384 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
CAPN1P07384 AC026691.1-201ENST00000602502 2017 ntBASIC16.33■□□□□ 0.21
CAPN1P07384 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CAPN1P07384 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CAPN1P07384 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CAPN1P07384 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
CAPN1P07384 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CAPN1P07384 AC008741.2-201ENST00000612792 3115 ntBASIC16.33■□□□□ 0.21
CAPN1P07384 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
CAPN1P07384 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN1P07384 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN1P07384 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CAPN1P07384 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
CAPN1P07384 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.33■□□□□ 0.2
CAPN1P07384 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN1P07384 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN1P07384 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN1P07384 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.33■□□□□ 0.2
CAPN1P07384 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.33■□□□□ 0.2
CAPN1P07384 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN1P07384 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN1P07384 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.33■□□□□ 0.2
CAPN1P07384 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.33■□□□□ 0.2
CAPN1P07384 AL691403.2-201ENST00000618460 490 ntBASIC16.33■□□□□ 0.2
CAPN1P07384 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN1P07384 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN1P07384 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN1P07384 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN1P07384 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.33■□□□□ 0.2
CAPN1P07384 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.33■□□□□ 0.2
CAPN1P07384 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CAPN1P07384 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN1P07384 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CAPN1P07384 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.33■□□□□ 0.2
CAPN1P07384 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN1P07384 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN1P07384 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN1P07384 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN1P07384 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.33■□□□□ 0.2
CAPN1P07384 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN1P07384 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.33■□□□□ 0.2
CAPN1P07384 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
CAPN1P07384 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.33■□□□□ 0.2
CAPN1P07384 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN1P07384 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.33■□□□□ 0.2
CAPN1P07384 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CAPN1P07384 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN1P07384 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CAPN1P07384 CICP6-201ENST00000457191 2729 ntBASIC16.32■□□□□ 0.2
CAPN1P07384 LINC02199-201ENST00000506655 2702 ntBASIC16.32■□□□□ 0.2
CAPN1P07384 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN1P07384 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN1P07384 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN1P07384 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN1P07384 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN1P07384 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN1P07384 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN1P07384 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN1P07384 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN1P07384 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.32■□□□□ 0.2
CAPN1P07384 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN1P07384 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN1P07384 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms