Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 AC073439.1-201ENST00000624121 1774 ntBASIC16.56■□□□□ 0.24
TRBC1P01850 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBC1P01850 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.56■□□□□ 0.24
TRBC1P01850 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRBC1P01850 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.56■□□□□ 0.24
TRBC1P01850 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.56■□□□□ 0.24
TRBC1P01850 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
TRBC1P01850 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TRBC1P01850 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRBC1P01850 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.55■□□□□ 0.24
TRBC1P01850 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBC1P01850 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRBC1P01850 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBC1P01850 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRBC1P01850 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRBC1P01850 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBC1P01850 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBC1P01850 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.55■□□□□ 0.24
TRBC1P01850 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
TRBC1P01850 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBC1P01850 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
TRBC1P01850 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.55■□□□□ 0.24
TRBC1P01850 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.55■□□□□ 0.24
TRBC1P01850 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBC1P01850 DNAJB3-202ENST00000449667 1266 ntBASIC16.55■□□□□ 0.24
TRBC1P01850 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TRBC1P01850 PRYP6-201ENST00000514804 343 ntBASIC16.55■□□□□ 0.24
TRBC1P01850 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.55■□□□□ 0.24
TRBC1P01850 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.55■□□□□ 0.24
TRBC1P01850 LINC01225-203ENST00000563550 1244 ntBASIC16.55■□□□□ 0.24
TRBC1P01850 AL138918.1-201ENST00000568306 659 ntBASIC16.55■□□□□ 0.24
TRBC1P01850 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.55■□□□□ 0.24
TRBC1P01850 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.55■□□□□ 0.24
TRBC1P01850 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBC1P01850 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
TRBC1P01850 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBC1P01850 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRBC1P01850 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
TRBC1P01850 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBC1P01850 ME2P1-201ENST00000426028 1970 ntBASIC16.55■□□□□ 0.24
TRBC1P01850 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBC1P01850 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRBC1P01850 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBC1P01850 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBC1P01850 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRBC1P01850 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBC1P01850 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRBC1P01850 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBC1P01850 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBC1P01850 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBC1P01850 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.54■□□□□ 0.24
TRBC1P01850 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRBC1P01850 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBC1P01850 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.54■□□□□ 0.24
TRBC1P01850 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.54■□□□□ 0.24
TRBC1P01850 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
TRBC1P01850 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
TRBC1P01850 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
TRBC1P01850 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBC1P01850 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBC1P01850 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
TRBC1P01850 AL592309.1-201ENST00000443127 649 ntBASIC16.54■□□□□ 0.24
TRBC1P01850 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.54■□□□□ 0.24
TRBC1P01850 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
TRBC1P01850 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.54■□□□□ 0.24
TRBC1P01850 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.54■□□□□ 0.24
TRBC1P01850 KRT8P23-201ENST00000560090 1207 ntBASIC16.54■□□□□ 0.24
TRBC1P01850 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.54■□□□□ 0.24
TRBC1P01850 AC027307.2-201ENST00000591252 911 ntBASIC16.54■□□□□ 0.24
TRBC1P01850 AC073389.1-201ENST00000595595 795 ntBASIC16.54■□□□□ 0.24
TRBC1P01850 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.54■□□□□ 0.24
TRBC1P01850 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBC1P01850 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBC1P01850 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBC1P01850 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.54■□□□□ 0.24
TRBC1P01850 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
TRBC1P01850 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRBC1P01850 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBC1P01850 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.54■□□□□ 0.24
TRBC1P01850 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBC1P01850 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBC1P01850 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBC1P01850 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.53■□□□□ 0.24
TRBC1P01850 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRBC1P01850 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.53■□□□□ 0.24
TRBC1P01850 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRBC1P01850 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRBC1P01850 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBC1P01850 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
TRBC1P01850 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRBC1P01850 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBC1P01850 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBC1P01850 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.53■□□□□ 0.24
TRBC1P01850 CNN2P11-201ENST00000429351 262 ntBASIC16.53■□□□□ 0.24
TRBC1P01850 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.53■□□□□ 0.24
TRBC1P01850 AC069335.1-201ENST00000489972 472 ntBASIC16.53■□□□□ 0.24
TRBC1P01850 IGHV3-62-201ENST00000520057 340 ntBASIC16.53■□□□□ 0.24
TRBC1P01850 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRBC1P01850 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBC1P01850 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms