Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IFNA1P01562 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.14□□□□□ -0.31
IFNA1P01562 UBE2SP1-201ENST00000450587 669 ntBASIC13.14□□□□□ -0.31
IFNA1P01562 GXYLT1P6-201ENST00000456472 1187 ntBASIC13.14□□□□□ -0.31
IFNA1P01562 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
IFNA1P01562 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC13.14□□□□□ -0.31
IFNA1P01562 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.14□□□□□ -0.31
IFNA1P01562 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
IFNA1P01562 AL157888.1-201ENST00000631930 593 ntBASIC13.14□□□□□ -0.31
IFNA1P01562 AC116562.4-202ENST00000641738 218 ntBASIC13.14□□□□□ -0.31
IFNA1P01562 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IFNA1P01562 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
IFNA1P01562 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
IFNA1P01562 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IFNA1P01562 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IFNA1P01562 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IFNA1P01562 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.14□□□□□ -0.31
IFNA1P01562 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
IFNA1P01562 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
IFNA1P01562 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
IFNA1P01562 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.14□□□□□ -0.31
IFNA1P01562 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.14□□□□□ -0.31
IFNA1P01562 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
IFNA1P01562 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IFNA1P01562 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
IFNA1P01562 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
IFNA1P01562 AC092338.2-201ENST00000568827 1415 ntBASIC13.13□□□□□ -0.31
IFNA1P01562 AL135905.2-201ENST00000584934 1404 ntBASIC13.13□□□□□ -0.31
IFNA1P01562 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 CDC14C-201ENST00000428251 1719 ntBASIC13.13□□□□□ -0.31
IFNA1P01562 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.13□□□□□ -0.31
IFNA1P01562 AC007292.2-201ENST00000593524 1812 ntBASIC13.13□□□□□ -0.31
IFNA1P01562 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
IFNA1P01562 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
IFNA1P01562 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 AC138035.3-201ENST00000622706 2791 ntBASIC13.13□□□□□ -0.31
IFNA1P01562 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.13□□□□□ -0.31
IFNA1P01562 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.13□□□□□ -0.31
IFNA1P01562 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 ID1-201ENST00000376105 1233 ntBASIC13.13□□□□□ -0.31
IFNA1P01562 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC13.13□□□□□ -0.31
IFNA1P01562 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.13□□□□□ -0.31
IFNA1P01562 MTCL1P1-201ENST00000446207 792 ntBASIC13.13□□□□□ -0.31
IFNA1P01562 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC13.13□□□□□ -0.31
IFNA1P01562 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC13.13□□□□□ -0.31
IFNA1P01562 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
IFNA1P01562 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
IFNA1P01562 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
IFNA1P01562 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC13.13□□□□□ -0.31
IFNA1P01562 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.13□□□□□ -0.31
IFNA1P01562 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.13□□□□□ -0.31
IFNA1P01562 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
IFNA1P01562 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.13□□□□□ -0.31
IFNA1P01562 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.13□□□□□ -0.31
IFNA1P01562 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
IFNA1P01562 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.13□□□□□ -0.31
IFNA1P01562 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
IFNA1P01562 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IFNA1P01562 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IFNA1P01562 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IFNA1P01562 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IFNA1P01562 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
IFNA1P01562 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IFNA1P01562 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.12□□□□□ -0.31
IFNA1P01562 AL135999.2-201ENST00000622438 1686 ntBASIC13.12□□□□□ -0.31
IFNA1P01562 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IFNA1P01562 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
IFNA1P01562 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IFNA1P01562 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IFNA1P01562 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.12□□□□□ -0.31
IFNA1P01562 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IFNA1P01562 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC13.12□□□□□ -0.31
IFNA1P01562 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms