Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LTAP01374 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LTAP01374 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
LTAP01374 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.49□□□□□ -0.41
LTAP01374 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.49□□□□□ -0.41
LTAP01374 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.49□□□□□ -0.41
LTAP01374 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.49□□□□□ -0.41
LTAP01374 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12.49□□□□□ -0.41
LTAP01374 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LTAP01374 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LTAP01374 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.49□□□□□ -0.41
LTAP01374 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC12.49□□□□□ -0.41
LTAP01374 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LTAP01374 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LTAP01374 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
LTAP01374 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC12.49□□□□□ -0.41
LTAP01374 GID4-202ENST00000376345 1391 ntTSL 3 BASIC12.49□□□□□ -0.41
LTAP01374 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC12.49□□□□□ -0.41
LTAP01374 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LTAP01374 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LTAP01374 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
LTAP01374 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
LTAP01374 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC12.49□□□□□ -0.41
LTAP01374 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LTAP01374 AC087499.1-201ENST00000418141 1075 ntBASIC12.49□□□□□ -0.41
LTAP01374 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LTAP01374 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LTAP01374 AC092647.4-201ENST00000457211 535 ntBASIC12.49□□□□□ -0.41
LTAP01374 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC12.49□□□□□ -0.41
LTAP01374 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC12.49□□□□□ -0.41
LTAP01374 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LTAP01374 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.49□□□□□ -0.41
LTAP01374 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
LTAP01374 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LTAP01374 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LTAP01374 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LTAP01374 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LTAP01374 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LTAP01374 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC12.49□□□□□ -0.41
LTAP01374 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LTAP01374 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.49□□□□□ -0.41
LTAP01374 SSR4P1-203ENST00000599569 2260 ntBASIC12.49□□□□□ -0.41
LTAP01374 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.49□□□□□ -0.41
LTAP01374 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LTAP01374 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LTAP01374 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.49□□□□□ -0.41
LTAP01374 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LTAP01374 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LTAP01374 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LTAP01374 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LTAP01374 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
LTAP01374 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.48□□□□□ -0.41
LTAP01374 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.48□□□□□ -0.41
LTAP01374 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.48□□□□□ -0.41
LTAP01374 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC12.48□□□□□ -0.41
LTAP01374 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LTAP01374 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.48□□□□□ -0.41
LTAP01374 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.48□□□□□ -0.41
LTAP01374 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.48□□□□□ -0.41
LTAP01374 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.48□□□□□ -0.41
LTAP01374 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LTAP01374 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC12.48□□□□□ -0.41
LTAP01374 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC12.48□□□□□ -0.41
LTAP01374 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LTAP01374 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC12.48□□□□□ -0.41
LTAP01374 AC091607.1-201ENST00000490318 1060 ntBASIC12.48□□□□□ -0.41
LTAP01374 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC12.48□□□□□ -0.41
LTAP01374 KRT8P26-201ENST00000534154 1276 ntBASIC12.48□□□□□ -0.41
LTAP01374 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC12.48□□□□□ -0.41
LTAP01374 AC011498.5-201ENST00000592027 486 ntBASIC12.48□□□□□ -0.41
LTAP01374 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.48□□□□□ -0.41
LTAP01374 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.48□□□□□ -0.41
LTAP01374 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC12.48□□□□□ -0.41
LTAP01374 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.48□□□□□ -0.41
LTAP01374 AC073592.4-201ENST00000623827 446 ntBASIC12.48□□□□□ -0.41
LTAP01374 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC12.48□□□□□ -0.41
LTAP01374 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC12.48□□□□□ -0.41
LTAP01374 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms