Protein–RNA interactions for Protein: O95447

LCA5L, Lebercilin-like protein, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5LO95447 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
LCA5LO95447 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCA5LO95447 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCA5LO95447 AC012569.1-201ENST00000591191 1524 ntBASIC17.56■□□□□ 0.4
LCA5LO95447 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LCA5LO95447 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCA5LO95447 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCA5LO95447 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCA5LO95447 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LCA5LO95447 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.56■□□□□ 0.4
LCA5LO95447 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCA5LO95447 AC144831.1-201ENST00000573312 2656 ntBASIC17.55■□□□□ 0.4
LCA5LO95447 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCA5LO95447 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
LCA5LO95447 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCA5LO95447 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.55■□□□□ 0.4
LCA5LO95447 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCA5LO95447 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.55■□□□□ 0.4
LCA5LO95447 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCA5LO95447 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LCA5LO95447 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCA5LO95447 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCA5LO95447 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCA5LO95447 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCA5LO95447 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
LCA5LO95447 U82695.1-201ENST00000635752 1889 ntBASIC17.55■□□□□ 0.4
LCA5LO95447 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LCA5LO95447 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCA5LO95447 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCA5LO95447 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LCA5LO95447 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LCA5LO95447 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.55■□□□□ 0.4
LCA5LO95447 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCA5LO95447 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.55■□□□□ 0.4
LCA5LO95447 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.55■□□□□ 0.4
LCA5LO95447 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LCA5LO95447 AC136632.2-201ENST00000512891 861 ntBASIC17.55■□□□□ 0.4
LCA5LO95447 AF238378.1-201ENST00000526806 358 ntBASIC17.55■□□□□ 0.4
LCA5LO95447 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.55■□□□□ 0.4
LCA5LO95447 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.55■□□□□ 0.4
LCA5LO95447 OR7E47P-204ENST00000575924 449 ntBASIC17.55■□□□□ 0.4
LCA5LO95447 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.55■□□□□ 0.4
LCA5LO95447 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.55■□□□□ 0.4
LCA5LO95447 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCA5LO95447 AC012313.10-201ENST00000623509 926 ntBASIC17.55■□□□□ 0.4
LCA5LO95447 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCA5LO95447 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LCA5LO95447 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LCA5LO95447 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LCA5LO95447 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LCA5LO95447 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCA5LO95447 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
LCA5LO95447 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.55■□□□□ 0.4
LCA5LO95447 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCA5LO95447 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LCA5LO95447 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.55■□□□□ 0.4
LCA5LO95447 AL513477.1-201ENST00000602865 2407 ntBASIC17.55■□□□□ 0.4
LCA5LO95447 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCA5LO95447 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCA5LO95447 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LCA5LO95447 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
LCA5LO95447 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCA5LO95447 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCA5LO95447 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LCA5LO95447 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LCA5LO95447 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCA5LO95447 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCA5LO95447 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
LCA5LO95447 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCA5LO95447 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LCA5LO95447 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.54■□□□□ 0.4
LCA5LO95447 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCA5LO95447 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
LCA5LO95447 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.54■□□□□ 0.4
LCA5LO95447 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCA5LO95447 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LCA5LO95447 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.54■□□□□ 0.4
LCA5LO95447 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
LCA5LO95447 SAPCD2P3-201ENST00000455031 850 ntBASIC17.54■□□□□ 0.4
LCA5LO95447 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.54■□□□□ 0.4
LCA5LO95447 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.54■□□□□ 0.4
LCA5LO95447 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.54■□□□□ 0.4
LCA5LO95447 MIR3909-201ENST00000579518 119 ntBASIC17.54■□□□□ 0.4
LCA5LO95447 CLEC4GP1-201ENST00000596555 870 ntBASIC17.54■□□□□ 0.4
LCA5LO95447 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCA5LO95447 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.54■□□□□ 0.4
LCA5LO95447 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCA5LO95447 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
LCA5LO95447 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.54■□□□□ 0.4
LCA5LO95447 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.54■□□□□ 0.4
LCA5LO95447 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCA5LO95447 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.54■□□□□ 0.4
LCA5LO95447 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCA5LO95447 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCA5LO95447 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCA5LO95447 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LCA5LO95447 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
LCA5LO95447 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCA5LO95447 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.53■□□□□ 0.4
LCA5LO95447 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms