Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CLPXO76031 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CLPXO76031 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLPXO76031 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.1■□□□□ 0.01
CLPXO76031 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLPXO76031 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLPXO76031 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CLPXO76031 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.1■□□□□ 0.01
CLPXO76031 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.1■□□□□ 0.01
CLPXO76031 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.1■□□□□ 0.01
CLPXO76031 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLPXO76031 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.1■□□□□ 0.01
CLPXO76031 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.1■□□□□ 0.01
CLPXO76031 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
CLPXO76031 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CLPXO76031 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.1■□□□□ 0.01
CLPXO76031 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.1■□□□□ 0.01
CLPXO76031 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.1■□□□□ 0.01
CLPXO76031 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLPXO76031 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLPXO76031 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLPXO76031 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLPXO76031 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.1■□□□□ 0.01
CLPXO76031 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.1■□□□□ 0.01
CLPXO76031 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CLPXO76031 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLPXO76031 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLPXO76031 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLPXO76031 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.1■□□□□ 0.01
CLPXO76031 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLPXO76031 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CLPXO76031 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
CLPXO76031 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.09■□□□□ 0.01
CLPXO76031 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.09■□□□□ 0.01
CLPXO76031 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.09■□□□□ 0.01
CLPXO76031 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CLPXO76031 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.09■□□□□ 0.01
CLPXO76031 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.09■□□□□ 0.01
CLPXO76031 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CLPXO76031 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.09■□□□□ 0.01
CLPXO76031 KRT18P65-201ENST00000439811 1286 ntBASIC15.09■□□□□ 0.01
CLPXO76031 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.09■□□□□ 0.01
CLPXO76031 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CLPXO76031 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.09■□□□□ 0.01
CLPXO76031 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.09■□□□□ 0.01
CLPXO76031 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CLPXO76031 AL441883.1-201ENST00000566170 1045 ntBASIC15.09■□□□□ 0.01
CLPXO76031 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.09■□□□□ 0.01
CLPXO76031 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.09■□□□□ 0.01
CLPXO76031 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.09■□□□□ 0.01
CLPXO76031 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CLPXO76031 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
CLPXO76031 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.09■□□□□ 0.01
CLPXO76031 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 TUBB8P12-201ENST00000308911 1335 ntBASIC15.09■□□□□ 0.01
CLPXO76031 TUBB7P-202ENST00000428444 1305 ntBASIC15.09■□□□□ 0.01
CLPXO76031 TUBB8P7-204ENST00000567960 1332 ntBASIC15.09■□□□□ 0.01
CLPXO76031 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.09■□□□□ 0.01
CLPXO76031 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.09■□□□□ 0.01
CLPXO76031 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.09■□□□□ 0.01
CLPXO76031 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.09■□□□□ 0.01
CLPXO76031 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CLPXO76031 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.09■□□□□ 0.01
CLPXO76031 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 GGT4P-201ENST00000623672 1708 ntBASIC15.09■□□□□ 0.01
CLPXO76031 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLPXO76031 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CLPXO76031 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLPXO76031 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLPXO76031 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
CLPXO76031 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLPXO76031 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLPXO76031 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLPXO76031 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
CLPXO76031 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms