Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1BO75841 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.44□□□□□ -0.1
UPK1BO75841 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1BO75841 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1BO75841 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.44□□□□□ -0.1
UPK1BO75841 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.44□□□□□ -0.1
UPK1BO75841 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
UPK1BO75841 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1BO75841 KRT17P3-201ENST00000420566 1262 ntBASIC14.44□□□□□ -0.1
UPK1BO75841 TSPY12P-201ENST00000421279 868 ntBASIC14.44□□□□□ -0.1
UPK1BO75841 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.44□□□□□ -0.1
UPK1BO75841 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1BO75841 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1BO75841 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC14.44□□□□□ -0.1
UPK1BO75841 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.44□□□□□ -0.1
UPK1BO75841 MIR3917-201ENST00000580971 93 ntBASIC14.44□□□□□ -0.1
UPK1BO75841 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.44□□□□□ -0.1
UPK1BO75841 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
UPK1BO75841 AC073111.5-205ENST00000641717 521 ntBASIC14.44□□□□□ -0.1
UPK1BO75841 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.44□□□□□ -0.1
UPK1BO75841 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.44□□□□□ -0.1
UPK1BO75841 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
UPK1BO75841 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
UPK1BO75841 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1BO75841 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1BO75841 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1BO75841 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.44□□□□□ -0.1
UPK1BO75841 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1BO75841 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1BO75841 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
UPK1BO75841 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1BO75841 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1BO75841 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.44□□□□□ -0.1
UPK1BO75841 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
UPK1BO75841 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
UPK1BO75841 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1BO75841 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1BO75841 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1BO75841 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.44□□□□□ -0.1
UPK1BO75841 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1BO75841 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.43□□□□□ -0.1
UPK1BO75841 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
UPK1BO75841 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
UPK1BO75841 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.43□□□□□ -0.1
UPK1BO75841 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
UPK1BO75841 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.43□□□□□ -0.1
UPK1BO75841 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.43□□□□□ -0.1
UPK1BO75841 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
UPK1BO75841 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
UPK1BO75841 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
UPK1BO75841 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 AC133681.1-201ENST00000465482 601 ntBASIC14.43□□□□□ -0.1
UPK1BO75841 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC14.43□□□□□ -0.1
UPK1BO75841 AC233263.1-201ENST00000578059 224 ntBASIC14.43□□□□□ -0.1
UPK1BO75841 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.43□□□□□ -0.1
UPK1BO75841 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.43□□□□□ -0.1
UPK1BO75841 AC073195.1-201ENST00000607241 877 ntBASIC14.43□□□□□ -0.1
UPK1BO75841 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.43□□□□□ -0.1
UPK1BO75841 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.43□□□□□ -0.1
UPK1BO75841 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.43□□□□□ -0.1
UPK1BO75841 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
UPK1BO75841 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
UPK1BO75841 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
UPK1BO75841 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1BO75841 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.43□□□□□ -0.1
UPK1BO75841 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.43□□□□□ -0.1
UPK1BO75841 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.43□□□□□ -0.1
UPK1BO75841 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1BO75841 AC097374.2-201ENST00000618617 1306 ntBASIC14.42□□□□□ -0.1
UPK1BO75841 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.42□□□□□ -0.1
UPK1BO75841 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1BO75841 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms