Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CLDN11O75508 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CLDN11O75508 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CLDN11O75508 AC026150.2-201ENST00000564693 1156 ntBASIC16.85■□□□□ 0.29
CLDN11O75508 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.85■□□□□ 0.29
CLDN11O75508 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.85■□□□□ 0.29
CLDN11O75508 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN11O75508 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN11O75508 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.85■□□□□ 0.29
CLDN11O75508 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN11O75508 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN11O75508 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN11O75508 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN11O75508 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CLDN11O75508 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN11O75508 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN11O75508 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN11O75508 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN11O75508 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN11O75508 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CLDN11O75508 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN11O75508 AC005622.1-201ENST00000636801 1703 ntBASIC16.84■□□□□ 0.29
CLDN11O75508 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN11O75508 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN11O75508 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN11O75508 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN11O75508 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN11O75508 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN11O75508 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CLDN11O75508 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CLDN11O75508 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN11O75508 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN11O75508 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN11O75508 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN11O75508 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN11O75508 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN11O75508 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN11O75508 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN11O75508 FAM220BP-201ENST00000377689 816 ntBASIC16.84■□□□□ 0.29
CLDN11O75508 HLA-H-201ENST00000383620 1096 ntBASIC16.84■□□□□ 0.29
CLDN11O75508 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.84■□□□□ 0.29
CLDN11O75508 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN11O75508 SPDYE14P-201ENST00000442619 822 ntBASIC16.84■□□□□ 0.29
CLDN11O75508 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN11O75508 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN11O75508 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN11O75508 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN11O75508 AC093028.1-201ENST00000622998 982 ntBASIC16.84■□□□□ 0.29
CLDN11O75508 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN11O75508 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CLDN11O75508 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN11O75508 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN11O75508 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN11O75508 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN11O75508 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLDN11O75508 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
CLDN11O75508 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN11O75508 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN11O75508 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLDN11O75508 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN11O75508 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
CLDN11O75508 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN11O75508 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN11O75508 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN11O75508 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN11O75508 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN11O75508 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN11O75508 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN11O75508 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN11O75508 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN11O75508 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLDN11O75508 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CLDN11O75508 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLDN11O75508 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLDN11O75508 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.83■□□□□ 0.29
CLDN11O75508 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CLDN11O75508 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLDN11O75508 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CLDN11O75508 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN11O75508 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN11O75508 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN11O75508 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDN11O75508 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CLDN11O75508 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN11O75508 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN11O75508 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN11O75508 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN11O75508 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
CLDN11O75508 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CLDN11O75508 SPDYE7P-202ENST00000420373 878 ntBASIC16.83■□□□□ 0.28
CLDN11O75508 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN11O75508 AL645939.2-201ENST00000427340 991 ntBASIC16.83■□□□□ 0.28
CLDN11O75508 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.83■□□□□ 0.28
CLDN11O75508 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN11O75508 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDN11O75508 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.83■□□□□ 0.28
CLDN11O75508 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN11O75508 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.83■□□□□ 0.28
CLDN11O75508 RARRES2P9-201ENST00000565168 469 ntBASIC16.83■□□□□ 0.28
CLDN11O75508 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms