Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPC4O75487 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.65■□□□□ 0.26
GPC4O75487 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPC4O75487 CYP2T1P-202ENST00000641596 2535 ntBASIC16.65■□□□□ 0.26
GPC4O75487 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GPC4O75487 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPC4O75487 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GPC4O75487 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.65■□□□□ 0.26
GPC4O75487 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPC4O75487 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPC4O75487 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.65■□□□□ 0.26
GPC4O75487 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPC4O75487 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GPC4O75487 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPC4O75487 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
GPC4O75487 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.26
GPC4O75487 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
GPC4O75487 TOP3BP1-201ENST00000420768 1380 ntBASIC16.64■□□□□ 0.26
GPC4O75487 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GPC4O75487 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.64■□□□□ 0.25
GPC4O75487 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GPC4O75487 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
GPC4O75487 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
GPC4O75487 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.64■□□□□ 0.25
GPC4O75487 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
GPC4O75487 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GPC4O75487 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
GPC4O75487 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
GPC4O75487 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.64■□□□□ 0.25
GPC4O75487 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GPC4O75487 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GPC4O75487 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.64■□□□□ 0.25
GPC4O75487 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
GPC4O75487 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.64■□□□□ 0.25
GPC4O75487 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.64■□□□□ 0.25
GPC4O75487 AC009947.1-201ENST00000444350 727 ntBASIC16.64■□□□□ 0.25
GPC4O75487 AC108751.1-201ENST00000490852 363 ntBASIC16.64■□□□□ 0.25
GPC4O75487 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.64■□□□□ 0.25
GPC4O75487 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GPC4O75487 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GPC4O75487 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GPC4O75487 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GPC4O75487 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.64■□□□□ 0.25
GPC4O75487 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.64■□□□□ 0.25
GPC4O75487 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GPC4O75487 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.64■□□□□ 0.25
GPC4O75487 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
GPC4O75487 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GPC4O75487 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GPC4O75487 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GPC4O75487 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.63■□□□□ 0.25
GPC4O75487 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.63■□□□□ 0.25
GPC4O75487 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GPC4O75487 AL162727.3-201ENST00000635661 2787 ntBASIC16.63■□□□□ 0.25
GPC4O75487 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GPC4O75487 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
GPC4O75487 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.63■□□□□ 0.25
GPC4O75487 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GPC4O75487 MIR600HG-201ENST00000449175 5984 ntBASIC16.63■□□□□ 0.25
GPC4O75487 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GPC4O75487 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GPC4O75487 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GPC4O75487 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
GPC4O75487 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GPC4O75487 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GPC4O75487 MRPL20P1-201ENST00000400819 433 ntBASIC16.63■□□□□ 0.25
GPC4O75487 PRSS29P-201ENST00000440800 595 ntBASIC16.63■□□□□ 0.25
GPC4O75487 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GPC4O75487 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.63■□□□□ 0.25
GPC4O75487 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
GPC4O75487 AC079776.4-201ENST00000511039 504 ntBASIC16.63■□□□□ 0.25
GPC4O75487 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.63■□□□□ 0.25
GPC4O75487 AP002490.2-201ENST00000524791 560 ntBASIC16.63■□□□□ 0.25
GPC4O75487 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.63■□□□□ 0.25
GPC4O75487 AC107918.2-201ENST00000530817 355 ntBASIC16.63■□□□□ 0.25
GPC4O75487 AC145285.3-201ENST00000564603 959 ntBASIC16.63■□□□□ 0.25
GPC4O75487 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.63■□□□□ 0.25
GPC4O75487 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GPC4O75487 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GPC4O75487 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.63■□□□□ 0.25
GPC4O75487 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.63■□□□□ 0.25
GPC4O75487 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GPC4O75487 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.63■□□□□ 0.25
GPC4O75487 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
GPC4O75487 PCDHA1-201ENST00000378133 2726 ntBASIC16.63■□□□□ 0.25
GPC4O75487 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GPC4O75487 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.63■□□□□ 0.25
GPC4O75487 IL9RP2-201ENST00000423948 1312 ntBASIC16.63■□□□□ 0.25
GPC4O75487 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
GPC4O75487 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GPC4O75487 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GPC4O75487 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.63■□□□□ 0.25
GPC4O75487 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
GPC4O75487 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.63■□□□□ 0.25
GPC4O75487 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.63■□□□□ 0.25
GPC4O75487 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GPC4O75487 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
GPC4O75487 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC4O75487 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC4O75487 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms