Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.2■□□□□ 0.34
LRCH4O75427 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LRCH4O75427 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH4O75427 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH4O75427 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH4O75427 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.2■□□□□ 0.34
LRCH4O75427 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.2■□□□□ 0.34
LRCH4O75427 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH4O75427 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.2■□□□□ 0.34
LRCH4O75427 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.2■□□□□ 0.34
LRCH4O75427 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH4O75427 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH4O75427 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.2■□□□□ 0.34
LRCH4O75427 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.2■□□□□ 0.34
LRCH4O75427 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.2■□□□□ 0.34
LRCH4O75427 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.2■□□□□ 0.34
LRCH4O75427 AC027601.4-201ENST00000611259 610 ntBASIC17.2■□□□□ 0.34
LRCH4O75427 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH4O75427 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH4O75427 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH4O75427 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.2■□□□□ 0.34
LRCH4O75427 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH4O75427 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
LRCH4O75427 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
LRCH4O75427 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH4O75427 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH4O75427 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LRCH4O75427 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH4O75427 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH4O75427 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH4O75427 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LRCH4O75427 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.19■□□□□ 0.34
LRCH4O75427 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH4O75427 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LRCH4O75427 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH4O75427 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.19■□□□□ 0.34
LRCH4O75427 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.19■□□□□ 0.34
LRCH4O75427 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH4O75427 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LRCH4O75427 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH4O75427 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH4O75427 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.19■□□□□ 0.34
LRCH4O75427 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH4O75427 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH4O75427 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH4O75427 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
LRCH4O75427 MED15P5-201ENST00000423150 992 ntBASIC17.19■□□□□ 0.34
LRCH4O75427 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.19■□□□□ 0.34
LRCH4O75427 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.19■□□□□ 0.34
LRCH4O75427 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH4O75427 AL591424.1-201ENST00000442569 1213 ntBASIC17.19■□□□□ 0.34
LRCH4O75427 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH4O75427 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.19■□□□□ 0.34
LRCH4O75427 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.19■□□□□ 0.34
LRCH4O75427 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.19■□□□□ 0.34
LRCH4O75427 AC092865.6-201ENST00000642101 219 ntBASIC17.19■□□□□ 0.34
LRCH4O75427 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH4O75427 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.19■□□□□ 0.34
LRCH4O75427 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
LRCH4O75427 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH4O75427 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.19■□□□□ 0.34
LRCH4O75427 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
LRCH4O75427 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH4O75427 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LRCH4O75427 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LRCH4O75427 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.18■□□□□ 0.34
LRCH4O75427 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH4O75427 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH4O75427 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
LRCH4O75427 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH4O75427 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.18■□□□□ 0.34
LRCH4O75427 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH4O75427 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.18■□□□□ 0.34
LRCH4O75427 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LRCH4O75427 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH4O75427 AL592424.1-201ENST00000563624 1536 ntBASIC17.18■□□□□ 0.34
LRCH4O75427 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH4O75427 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH4O75427 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.18■□□□□ 0.34
LRCH4O75427 AC016027.1-202ENST00000607927 1699 ntBASIC17.18■□□□□ 0.34
LRCH4O75427 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH4O75427 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH4O75427 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH4O75427 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH4O75427 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
LRCH4O75427 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH4O75427 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH4O75427 KRT18P3-201ENST00000451602 1288 ntBASIC17.18■□□□□ 0.34
LRCH4O75427 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH4O75427 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.18■□□□□ 0.34
LRCH4O75427 RNA5SP416-201ENST00000516838 111 ntBASIC17.18■□□□□ 0.34
LRCH4O75427 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.18■□□□□ 0.34
LRCH4O75427 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.18■□□□□ 0.34
LRCH4O75427 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.18■□□□□ 0.34
LRCH4O75427 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH4O75427 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LRCH4O75427 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.18■□□□□ 0.34
LRCH4O75427 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
LRCH4O75427 AC068137.2-201ENST00000605408 478 ntBASIC17.18■□□□□ 0.34
LRCH4O75427 AL078644.1-201ENST00000609881 752 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms