Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KDELR3O43731 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KDELR3O43731 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
KDELR3O43731 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
KDELR3O43731 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
KDELR3O43731 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.73■□□□□ 0.27
KDELR3O43731 AC005052.1-201ENST00000625181 2492 ntBASIC16.73■□□□□ 0.27
KDELR3O43731 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KDELR3O43731 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.73■□□□□ 0.27
KDELR3O43731 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KDELR3O43731 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KDELR3O43731 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KDELR3O43731 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
KDELR3O43731 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.73■□□□□ 0.27
KDELR3O43731 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
KDELR3O43731 GPS2P2-201ENST00000430745 888 ntBASIC16.73■□□□□ 0.27
KDELR3O43731 HLA-J-203ENST00000494367 1087 ntBASIC16.73■□□□□ 0.27
KDELR3O43731 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.73■□□□□ 0.27
KDELR3O43731 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.73■□□□□ 0.27
KDELR3O43731 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KDELR3O43731 AL589702.1-201ENST00000641229 1509 ntBASIC16.73■□□□□ 0.27
KDELR3O43731 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KDELR3O43731 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
KDELR3O43731 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KDELR3O43731 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KDELR3O43731 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
KDELR3O43731 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KDELR3O43731 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KDELR3O43731 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KDELR3O43731 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.73■□□□□ 0.27
KDELR3O43731 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
KDELR3O43731 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
KDELR3O43731 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KDELR3O43731 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
KDELR3O43731 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.72■□□□□ 0.27
KDELR3O43731 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.72■□□□□ 0.27
KDELR3O43731 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KDELR3O43731 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KDELR3O43731 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.72■□□□□ 0.27
KDELR3O43731 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
KDELR3O43731 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
KDELR3O43731 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
KDELR3O43731 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KDELR3O43731 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
KDELR3O43731 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.72■□□□□ 0.27
KDELR3O43731 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KDELR3O43731 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
KDELR3O43731 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KDELR3O43731 U82695.1-201ENST00000635752 1889 ntBASIC16.72■□□□□ 0.27
KDELR3O43731 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
KDELR3O43731 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
KDELR3O43731 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KDELR3O43731 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
KDELR3O43731 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.72■□□□□ 0.27
KDELR3O43731 RBPMS2P1-201ENST00000437762 623 ntBASIC16.72■□□□□ 0.27
KDELR3O43731 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KDELR3O43731 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KDELR3O43731 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KDELR3O43731 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KDELR3O43731 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
KDELR3O43731 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.72■□□□□ 0.27
KDELR3O43731 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.72■□□□□ 0.27
KDELR3O43731 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.72■□□□□ 0.27
KDELR3O43731 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.72■□□□□ 0.27
KDELR3O43731 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.72■□□□□ 0.27
KDELR3O43731 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KDELR3O43731 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KDELR3O43731 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.72■□□□□ 0.27
KDELR3O43731 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.72■□□□□ 0.27
KDELR3O43731 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KDELR3O43731 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
KDELR3O43731 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
KDELR3O43731 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KDELR3O43731 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.72■□□□□ 0.27
KDELR3O43731 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.72■□□□□ 0.27
KDELR3O43731 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KDELR3O43731 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
KDELR3O43731 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
KDELR3O43731 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.72■□□□□ 0.27
KDELR3O43731 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
KDELR3O43731 KRT18P28-201ENST00000453838 1332 ntBASIC16.71■□□□□ 0.27
KDELR3O43731 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KDELR3O43731 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.71■□□□□ 0.27
KDELR3O43731 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
KDELR3O43731 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KDELR3O43731 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
KDELR3O43731 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KDELR3O43731 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KDELR3O43731 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KDELR3O43731 AL139400.1-201ENST00000366220 510 ntBASIC16.71■□□□□ 0.27
KDELR3O43731 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
KDELR3O43731 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.71■□□□□ 0.27
KDELR3O43731 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KDELR3O43731 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.71■□□□□ 0.27
KDELR3O43731 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KDELR3O43731 TSEN15P1-201ENST00000423257 515 ntBASIC16.71■□□□□ 0.27
KDELR3O43731 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.71■□□□□ 0.27
KDELR3O43731 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.71■□□□□ 0.27
KDELR3O43731 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.71■□□□□ 0.27
KDELR3O43731 AC092183.1-201ENST00000469884 875 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms