Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.12■□□□□ 0.01
RNF13O43567 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.12■□□□□ 0.01
RNF13O43567 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.12■□□□□ 0.01
RNF13O43567 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
RNF13O43567 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF13O43567 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RNF13O43567 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF13O43567 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
RNF13O43567 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RNF13O43567 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF13O43567 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF13O43567 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF13O43567 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF13O43567 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF13O43567 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF13O43567 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF13O43567 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF13O43567 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF13O43567 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF13O43567 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RNF13O43567 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF13O43567 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF13O43567 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF13O43567 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF13O43567 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF13O43567 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF13O43567 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF13O43567 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF13O43567 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF13O43567 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF13O43567 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RNF13O43567 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF13O43567 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF13O43567 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
RNF13O43567 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF13O43567 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RNF13O43567 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF13O43567 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF13O43567 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF13O43567 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF13O43567 AC073621.1-201ENST00000392730 636 ntBASIC15.11■□□□□ 0.01
RNF13O43567 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF13O43567 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.11■□□□□ 0.01
RNF13O43567 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RNF13O43567 AL450487.1-201ENST00000426799 995 ntBASIC15.11■□□□□ 0.01
RNF13O43567 KRT18P67-201ENST00000432816 1264 ntBASIC15.11■□□□□ 0.01
RNF13O43567 HLA-J-202ENST00000469281 1241 ntBASIC15.11■□□□□ 0.01
RNF13O43567 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.11■□□□□ 0.01
RNF13O43567 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RNF13O43567 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF13O43567 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.11■□□□□ 0.01
RNF13O43567 AC105339.3-201ENST00000560043 636 ntBASIC15.11■□□□□ 0.01
RNF13O43567 RN7SL510P-201ENST00000581311 263 ntBASIC15.11■□□□□ 0.01
RNF13O43567 MPDU1-223ENST00000582151 728 ntBASIC15.11■□□□□ 0.01
RNF13O43567 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF13O43567 AL356488.2-201ENST00000602755 427 ntBASIC15.11■□□□□ 0.01
RNF13O43567 AL691432.3-201ENST00000621860 400 ntBASIC15.11■□□□□ 0.01
RNF13O43567 AC005593.1-201ENST00000624894 515 ntBASIC15.11■□□□□ 0.01
RNF13O43567 PGM5P2-202ENST00000637225 1043 ntBASIC15.11■□□□□ 0.01
RNF13O43567 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF13O43567 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF13O43567 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RNF13O43567 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF13O43567 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF13O43567 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF13O43567 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RNF13O43567 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF13O43567 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF13O43567 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF13O43567 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RNF13O43567 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF13O43567 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RNF13O43567 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF13O43567 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF13O43567 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF13O43567 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF13O43567 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RNF13O43567 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF13O43567 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF13O43567 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RNF13O43567 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF13O43567 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF13O43567 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.1■□□□□ 0.01
RNF13O43567 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF13O43567 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF13O43567 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF13O43567 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF13O43567 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF13O43567 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.1■□□□□ 0.01
RNF13O43567 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF13O43567 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.1■□□□□ 0.01
RNF13O43567 SLC25A6P2-201ENST00000497974 877 ntBASIC15.1■□□□□ 0.01
RNF13O43567 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF13O43567 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF13O43567 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF13O43567 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF13O43567 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.1■□□□□ 0.01
RNF13O43567 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF13O43567 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.1■□□□□ 0.01
RNF13O43567 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms