Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.65■□□□□ 0.26
SMAD6O43541 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD6O43541 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.65■□□□□ 0.26
SMAD6O43541 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.65■□□□□ 0.26
SMAD6O43541 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD6O43541 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD6O43541 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD6O43541 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD6O43541 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD6O43541 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD6O43541 CNN2P2-201ENST00000443536 909 ntBASIC16.65■□□□□ 0.26
SMAD6O43541 FAM86GP-201ENST00000448322 971 ntBASIC16.65■□□□□ 0.26
SMAD6O43541 CNN2P3-201ENST00000450201 906 ntBASIC16.65■□□□□ 0.26
SMAD6O43541 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.65■□□□□ 0.26
SMAD6O43541 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.65■□□□□ 0.26
SMAD6O43541 AC051619.7-201ENST00000568314 623 ntBASIC16.65■□□□□ 0.26
SMAD6O43541 MIR4453-201ENST00000584019 89 ntBASIC16.65■□□□□ 0.26
SMAD6O43541 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.65■□□□□ 0.26
SMAD6O43541 AL136317.3-201ENST00000618497 906 ntBASIC16.65■□□□□ 0.26
SMAD6O43541 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SMAD6O43541 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SMAD6O43541 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.65■□□□□ 0.26
SMAD6O43541 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.65■□□□□ 0.26
SMAD6O43541 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD6O43541 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SMAD6O43541 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.65■□□□□ 0.26
SMAD6O43541 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD6O43541 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
SMAD6O43541 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD6O43541 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.65■□□□□ 0.26
SMAD6O43541 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD6O43541 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD6O43541 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD6O43541 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
SMAD6O43541 AL589702.1-201ENST00000641229 1509 ntBASIC16.65■□□□□ 0.26
SMAD6O43541 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.65■□□□□ 0.26
SMAD6O43541 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SMAD6O43541 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
SMAD6O43541 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SMAD6O43541 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SMAD6O43541 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SMAD6O43541 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.64■□□□□ 0.25
SMAD6O43541 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.64■□□□□ 0.25
SMAD6O43541 AC009053.2-201ENST00000563701 2365 ntBASIC16.64■□□□□ 0.25
SMAD6O43541 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD6O43541 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.64■□□□□ 0.25
SMAD6O43541 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.64■□□□□ 0.25
SMAD6O43541 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
SMAD6O43541 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD6O43541 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD6O43541 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD6O43541 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.64■□□□□ 0.25
SMAD6O43541 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.64■□□□□ 0.25
SMAD6O43541 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.64■□□□□ 0.25
SMAD6O43541 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD6O43541 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.64■□□□□ 0.25
SMAD6O43541 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.64■□□□□ 0.25
SMAD6O43541 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD6O43541 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SMAD6O43541 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD6O43541 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD6O43541 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD6O43541 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD6O43541 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD6O43541 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SMAD6O43541 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD6O43541 LINC01144-201ENST00000626198 1710 ntBASIC16.64■□□□□ 0.25
SMAD6O43541 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD6O43541 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD6O43541 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.64■□□□□ 0.25
SMAD6O43541 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.64■□□□□ 0.25
SMAD6O43541 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD6O43541 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.64■□□□□ 0.25
SMAD6O43541 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD6O43541 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMAD6O43541 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMAD6O43541 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SMAD6O43541 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
SMAD6O43541 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.63■□□□□ 0.25
SMAD6O43541 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SMAD6O43541 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMAD6O43541 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMAD6O43541 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.63■□□□□ 0.25
SMAD6O43541 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMAD6O43541 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMAD6O43541 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMAD6O43541 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.63■□□□□ 0.25
SMAD6O43541 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMAD6O43541 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMAD6O43541 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.63■□□□□ 0.25
SMAD6O43541 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMAD6O43541 FAM220BP-201ENST00000377689 816 ntBASIC16.63■□□□□ 0.25
SMAD6O43541 HLA-H-201ENST00000383620 1096 ntBASIC16.63■□□□□ 0.25
SMAD6O43541 SPDYE7P-202ENST00000420373 878 ntBASIC16.63■□□□□ 0.25
SMAD6O43541 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.63■□□□□ 0.25
SMAD6O43541 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.63■□□□□ 0.25
SMAD6O43541 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMAD6O43541 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMAD6O43541 AC018529.1-201ENST00000613063 361 ntBASIC16.63■□□□□ 0.25
SMAD6O43541 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms