Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PHGDHO43175 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PHGDHO43175 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PHGDHO43175 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.51■□□□□ 0.23
PHGDHO43175 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.51■□□□□ 0.23
PHGDHO43175 AC073648.2-201ENST00000510116 352 ntBASIC16.51■□□□□ 0.23
PHGDHO43175 AC136632.2-201ENST00000512891 861 ntBASIC16.51■□□□□ 0.23
PHGDHO43175 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.51■□□□□ 0.23
PHGDHO43175 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.51■□□□□ 0.23
PHGDHO43175 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PHGDHO43175 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.51■□□□□ 0.23
PHGDHO43175 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PHGDHO43175 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.51■□□□□ 0.23
PHGDHO43175 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PHGDHO43175 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PHGDHO43175 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PHGDHO43175 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PHGDHO43175 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.51■□□□□ 0.23
PHGDHO43175 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.51■□□□□ 0.23
PHGDHO43175 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PHGDHO43175 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.51■□□□□ 0.23
PHGDHO43175 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PHGDHO43175 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PHGDHO43175 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.51■□□□□ 0.23
PHGDHO43175 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PHGDHO43175 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
PHGDHO43175 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PHGDHO43175 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.51■□□□□ 0.23
PHGDHO43175 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.51■□□□□ 0.23
PHGDHO43175 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
PHGDHO43175 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.51■□□□□ 0.23
PHGDHO43175 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.51■□□□□ 0.23
PHGDHO43175 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PHGDHO43175 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.5■□□□□ 0.23
PHGDHO43175 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PHGDHO43175 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.5■□□□□ 0.23
PHGDHO43175 AL513477.1-201ENST00000602865 2407 ntBASIC16.5■□□□□ 0.23
PHGDHO43175 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHGDHO43175 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PHGDHO43175 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.5■□□□□ 0.23
PHGDHO43175 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.5■□□□□ 0.23
PHGDHO43175 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PHGDHO43175 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHGDHO43175 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHGDHO43175 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHGDHO43175 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHGDHO43175 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.5■□□□□ 0.23
PHGDHO43175 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PHGDHO43175 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHGDHO43175 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHGDHO43175 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PHGDHO43175 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHGDHO43175 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.5■□□□□ 0.23
PHGDHO43175 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHGDHO43175 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.5■□□□□ 0.23
PHGDHO43175 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.5■□□□□ 0.23
PHGDHO43175 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PHGDHO43175 RNPS1P1-201ENST00000507437 918 ntBASIC16.5■□□□□ 0.23
PHGDHO43175 AC087641.1-201ENST00000557561 1021 ntBASIC16.5■□□□□ 0.23
PHGDHO43175 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.5■□□□□ 0.23
PHGDHO43175 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.5■□□□□ 0.23
PHGDHO43175 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.5■□□□□ 0.23
PHGDHO43175 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.5■□□□□ 0.23
PHGDHO43175 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PHGDHO43175 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHGDHO43175 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PHGDHO43175 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PHGDHO43175 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.5■□□□□ 0.23
PHGDHO43175 AC010491.1-201ENST00000563101 2797 ntBASIC16.5■□□□□ 0.23
PHGDHO43175 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.5■□□□□ 0.23
PHGDHO43175 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PHGDHO43175 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PHGDHO43175 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHGDHO43175 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHGDHO43175 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.5■□□□□ 0.23
PHGDHO43175 REXO1L8P-201ENST00000604378 1897 ntBASIC16.5■□□□□ 0.23
PHGDHO43175 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHGDHO43175 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHGDHO43175 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHGDHO43175 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHGDHO43175 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PHGDHO43175 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.49■□□□□ 0.23
PHGDHO43175 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PHGDHO43175 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.49■□□□□ 0.23
PHGDHO43175 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PHGDHO43175 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.49■□□□□ 0.23
PHGDHO43175 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PHGDHO43175 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PHGDHO43175 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PHGDHO43175 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHGDHO43175 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.49■□□□□ 0.23
PHGDHO43175 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.49■□□□□ 0.23
PHGDHO43175 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.49■□□□□ 0.23
PHGDHO43175 HNRNPDP1-201ENST00000439535 754 ntBASIC16.49■□□□□ 0.23
PHGDHO43175 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PHGDHO43175 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PHGDHO43175 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.49■□□□□ 0.23
PHGDHO43175 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.49■□□□□ 0.23
PHGDHO43175 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.49■□□□□ 0.23
PHGDHO43175 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms