Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
FOXN1O15353 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN1O15353 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN1O15353 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
FOXN1O15353 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN1O15353 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC19.69■□□□□ 0.74
FOXN1O15353 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.69■□□□□ 0.74
FOXN1O15353 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.69■□□□□ 0.74
FOXN1O15353 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
FOXN1O15353 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.69■□□□□ 0.74
FOXN1O15353 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.69■□□□□ 0.74
FOXN1O15353 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN1O15353 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC19.69■□□□□ 0.74
FOXN1O15353 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC19.69■□□□□ 0.74
FOXN1O15353 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC19.69■□□□□ 0.74
FOXN1O15353 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC19.69■□□□□ 0.74
FOXN1O15353 MIR4515-201ENST00000584082 81 ntBASIC19.69■□□□□ 0.74
FOXN1O15353 AL844908.2-201ENST00000609461 460 ntBASIC19.69■□□□□ 0.74
FOXN1O15353 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
FOXN1O15353 AC007431.3-201ENST00000623221 587 ntBASIC19.69■□□□□ 0.74
FOXN1O15353 PPA1-206ENST00000625364 644 ntTSL 5 BASIC19.69■□□□□ 0.74
FOXN1O15353 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN1O15353 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN1O15353 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
FOXN1O15353 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN1O15353 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN1O15353 AC046185.3-201ENST00000623228 1824 ntBASIC19.69■□□□□ 0.74
FOXN1O15353 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.69■□□□□ 0.74
FOXN1O15353 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.69■□□□□ 0.74
FOXN1O15353 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN1O15353 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
FOXN1O15353 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXN1O15353 AC116353.5-201ENST00000638148 1699 ntBASIC19.68■□□□□ 0.74
FOXN1O15353 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FOXN1O15353 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.68■□□□□ 0.74
FOXN1O15353 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXN1O15353 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXN1O15353 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FOXN1O15353 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXN1O15353 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FOXN1O15353 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
FOXN1O15353 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19.68■□□□□ 0.74
FOXN1O15353 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FOXN1O15353 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
FOXN1O15353 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC19.68■□□□□ 0.74
FOXN1O15353 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXN1O15353 CROCCP4-201ENST00000457096 498 ntBASIC19.68■□□□□ 0.74
FOXN1O15353 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXN1O15353 AC104989.1-201ENST00000519711 778 ntBASIC19.68■□□□□ 0.74
FOXN1O15353 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.68■□□□□ 0.74
FOXN1O15353 AL583810.1-201ENST00000553344 1045 ntBASIC19.68■□□□□ 0.74
FOXN1O15353 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
FOXN1O15353 AL009183.1-201ENST00000603760 355 ntBASIC19.68■□□□□ 0.74
FOXN1O15353 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXN1O15353 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FOXN1O15353 AC018529.1-201ENST00000613063 361 ntBASIC19.68■□□□□ 0.74
FOXN1O15353 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.68■□□□□ 0.74
FOXN1O15353 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.68■□□□□ 0.74
FOXN1O15353 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FOXN1O15353 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXN1O15353 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.68■□□□□ 0.74
FOXN1O15353 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXN1O15353 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
FOXN1O15353 AC087499.5-201ENST00000452760 1342 ntBASIC19.68■□□□□ 0.74
FOXN1O15353 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXN1O15353 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
FOXN1O15353 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXN1O15353 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXN1O15353 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXN1O15353 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
FOXN1O15353 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXN1O15353 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXN1O15353 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXN1O15353 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
FOXN1O15353 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FOXN1O15353 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.67■□□□□ 0.74
FOXN1O15353 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXN1O15353 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.67■□□□□ 0.74
FOXN1O15353 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.67■□□□□ 0.74
FOXN1O15353 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXN1O15353 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
FOXN1O15353 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC19.67■□□□□ 0.74
FOXN1O15353 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FOXN1O15353 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.67■□□□□ 0.74
FOXN1O15353 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19.67■□□□□ 0.74
FOXN1O15353 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC19.67■□□□□ 0.74
FOXN1O15353 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
FOXN1O15353 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.67■□□□□ 0.74
FOXN1O15353 FOS-206ENST00000555347 1280 ntTSL 2 BASIC19.67■□□□□ 0.74
FOXN1O15353 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.67■□□□□ 0.74
FOXN1O15353 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.67■□□□□ 0.74
FOXN1O15353 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC19.67■□□□□ 0.74
FOXN1O15353 SNX1-214ENST00000625244 324 ntTSL 5 BASIC19.67■□□□□ 0.74
FOXN1O15353 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.67■□□□□ 0.74
FOXN1O15353 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.67■□□□□ 0.74
FOXN1O15353 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXN1O15353 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXN1O15353 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.67■□□□□ 0.74
FOXN1O15353 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FOXN1O15353 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms