Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASQ2O14958 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CASQ2O14958 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASQ2O14958 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASQ2O14958 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASQ2O14958 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASQ2O14958 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASQ2O14958 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASQ2O14958 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASQ2O14958 ST20-AS1-201ENST00000560255 4223 ntBASIC15.76■□□□□ 0.11
CASQ2O14958 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.76■□□□□ 0.11
CASQ2O14958 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
CASQ2O14958 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASQ2O14958 AC026748.1-201ENST00000624349 3251 ntBASIC15.76■□□□□ 0.11
CASQ2O14958 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.76■□□□□ 0.11
CASQ2O14958 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASQ2O14958 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.76■□□□□ 0.11
CASQ2O14958 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASQ2O14958 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CASQ2O14958 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
CASQ2O14958 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.75■□□□□ 0.11
CASQ2O14958 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.75■□□□□ 0.11
CASQ2O14958 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CASQ2O14958 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.75■□□□□ 0.11
CASQ2O14958 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CASQ2O14958 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CASQ2O14958 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CASQ2O14958 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CASQ2O14958 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CASQ2O14958 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CASQ2O14958 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CASQ2O14958 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CASQ2O14958 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.75■□□□□ 0.11
CASQ2O14958 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CASQ2O14958 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CASQ2O14958 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.75■□□□□ 0.11
CASQ2O14958 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.75■□□□□ 0.11
CASQ2O14958 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CASQ2O14958 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CASQ2O14958 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.75■□□□□ 0.11
CASQ2O14958 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.75■□□□□ 0.11
CASQ2O14958 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.75■□□□□ 0.11
CASQ2O14958 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CASQ2O14958 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CASQ2O14958 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CASQ2O14958 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CASQ2O14958 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CASQ2O14958 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CASQ2O14958 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CASQ2O14958 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CASQ2O14958 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASQ2O14958 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CASQ2O14958 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CASQ2O14958 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.74■□□□□ 0.11
CASQ2O14958 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASQ2O14958 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CASQ2O14958 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CASQ2O14958 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASQ2O14958 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.74■□□□□ 0.11
CASQ2O14958 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CASQ2O14958 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.74■□□□□ 0.11
CASQ2O14958 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASQ2O14958 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CASQ2O14958 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.74■□□□□ 0.11
CASQ2O14958 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CASQ2O14958 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC15.74■□□□□ 0.11
CASQ2O14958 C1QBPP2-201ENST00000528754 825 ntBASIC15.74■□□□□ 0.11
CASQ2O14958 AC111152.3-201ENST00000569699 673 ntBASIC15.74■□□□□ 0.11
CASQ2O14958 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CASQ2O14958 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.74■□□□□ 0.11
CASQ2O14958 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CASQ2O14958 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASQ2O14958 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASQ2O14958 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASQ2O14958 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CASQ2O14958 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.74■□□□□ 0.11
CASQ2O14958 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASQ2O14958 AL135905.2-201ENST00000584934 1404 ntBASIC15.74■□□□□ 0.11
CASQ2O14958 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASQ2O14958 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASQ2O14958 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CASQ2O14958 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASQ2O14958 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.74■□□□□ 0.11
CASQ2O14958 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.74■□□□□ 0.11
CASQ2O14958 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASQ2O14958 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASQ2O14958 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASQ2O14958 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CASQ2O14958 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CASQ2O14958 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASQ2O14958 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CASQ2O14958 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASQ2O14958 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASQ2O14958 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CASQ2O14958 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASQ2O14958 AC006277.1-201ENST00000624348 1610 ntBASIC15.73■□□□□ 0.11
CASQ2O14958 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CASQ2O14958 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASQ2O14958 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASQ2O14958 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms