Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.65■□□□□ 0.42
O00370 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
O00370 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
O00370 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
O00370 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
O00370 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
O00370 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
O00370 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
O00370 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.65■□□□□ 0.42
O00370 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.65■□□□□ 0.42
O00370 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
O00370 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
O00370 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.65■□□□□ 0.42
O00370 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
O00370 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.64■□□□□ 0.42
O00370 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.64■□□□□ 0.42
O00370 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
O00370 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
O00370 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
O00370 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
O00370 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
O00370 GPAA1P2-202ENST00000606848 1787 ntBASIC17.64■□□□□ 0.41
O00370 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.64■□□□□ 0.41
O00370 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.64■□□□□ 0.41
O00370 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
O00370 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
O00370 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
O00370 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.64■□□□□ 0.41
O00370 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.64■□□□□ 0.41
O00370 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.64■□□□□ 0.41
O00370 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
O00370 YBX2P1-201ENST00000394192 760 ntBASIC17.64■□□□□ 0.41
O00370 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.64■□□□□ 0.41
O00370 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
O00370 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.64■□□□□ 0.41
O00370 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
O00370 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
O00370 AC091812.2-201ENST00000619081 385 ntBASIC17.64■□□□□ 0.41
O00370 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
O00370 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
O00370 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
O00370 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
O00370 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
O00370 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.64■□□□□ 0.41
O00370 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
O00370 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
O00370 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
O00370 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
O00370 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
O00370 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
O00370 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
O00370 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
O00370 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.63■□□□□ 0.41
O00370 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
O00370 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
O00370 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.63■□□□□ 0.41
O00370 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
O00370 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
O00370 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
O00370 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
O00370 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
O00370 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
O00370 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.63■□□□□ 0.41
O00370 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
O00370 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
O00370 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.63■□□□□ 0.41
O00370 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.63■□□□□ 0.41
O00370 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
O00370 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.63■□□□□ 0.41
O00370 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.63■□□□□ 0.41
O00370 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
O00370 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.63■□□□□ 0.41
O00370 AC099522.2-201ENST00000607001 744 ntBASIC17.63■□□□□ 0.41
O00370 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.63■□□□□ 0.41
O00370 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
O00370 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
O00370 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
O00370 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
O00370 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
O00370 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
O00370 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.62■□□□□ 0.41
O00370 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
O00370 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
O00370 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.62■□□□□ 0.41
O00370 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
O00370 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
O00370 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
O00370 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
O00370 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.62■□□□□ 0.41
O00370 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
O00370 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
O00370 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
O00370 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.62■□□□□ 0.41
O00370 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
O00370 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
O00370 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
O00370 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
O00370 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
O00370 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
O00370 AC002056.1-201ENST00000395613 760 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms