Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
UPK1AO00322 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.71■□□□□ 0.11
UPK1AO00322 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.71■□□□□ 0.11
UPK1AO00322 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.71■□□□□ 0.11
UPK1AO00322 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
UPK1AO00322 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.71■□□□□ 0.11
UPK1AO00322 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UPK1AO00322 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
UPK1AO00322 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.71■□□□□ 0.11
UPK1AO00322 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.71■□□□□ 0.11
UPK1AO00322 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UPK1AO00322 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
UPK1AO00322 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
UPK1AO00322 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.71■□□□□ 0.11
UPK1AO00322 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UPK1AO00322 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UPK1AO00322 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
UPK1AO00322 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.71■□□□□ 0.11
UPK1AO00322 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UPK1AO00322 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
UPK1AO00322 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
UPK1AO00322 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
UPK1AO00322 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.71■□□□□ 0.1
UPK1AO00322 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
UPK1AO00322 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
UPK1AO00322 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
UPK1AO00322 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.71■□□□□ 0.1
UPK1AO00322 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.7■□□□□ 0.1
UPK1AO00322 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1AO00322 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
UPK1AO00322 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
UPK1AO00322 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1AO00322 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1AO00322 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1AO00322 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.7■□□□□ 0.1
UPK1AO00322 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1AO00322 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
UPK1AO00322 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1AO00322 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1AO00322 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.7■□□□□ 0.1
UPK1AO00322 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1AO00322 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1AO00322 AL671710.1-201ENST00000610245 2349 ntBASIC15.7■□□□□ 0.1
UPK1AO00322 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.7■□□□□ 0.1
UPK1AO00322 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1AO00322 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
UPK1AO00322 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
UPK1AO00322 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.7■□□□□ 0.1
UPK1AO00322 AC108751.1-201ENST00000490852 363 ntBASIC15.7■□□□□ 0.1
UPK1AO00322 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1AO00322 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.7■□□□□ 0.1
UPK1AO00322 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.7■□□□□ 0.1
UPK1AO00322 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1AO00322 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
UPK1AO00322 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1AO00322 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1AO00322 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
UPK1AO00322 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1AO00322 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
UPK1AO00322 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.7■□□□□ 0.1
UPK1AO00322 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1AO00322 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1AO00322 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1AO00322 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.7■□□□□ 0.1
UPK1AO00322 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1AO00322 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1AO00322 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
UPK1AO00322 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1AO00322 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.7■□□□□ 0.1
UPK1AO00322 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.7■□□□□ 0.1
UPK1AO00322 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
UPK1AO00322 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1AO00322 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1AO00322 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1AO00322 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1AO00322 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1AO00322 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
UPK1AO00322 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1AO00322 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
UPK1AO00322 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1AO00322 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.69■□□□□ 0.1
UPK1AO00322 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
UPK1AO00322 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1AO00322 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.69■□□□□ 0.1
UPK1AO00322 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1AO00322 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1AO00322 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.69■□□□□ 0.1
UPK1AO00322 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1AO00322 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
UPK1AO00322 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1AO00322 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.69■□□□□ 0.1
UPK1AO00322 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1AO00322 PRSS29P-201ENST00000440800 595 ntBASIC15.69■□□□□ 0.1
UPK1AO00322 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1AO00322 IGHV3-22-201ENST00000520721 359 ntBASIC15.69■□□□□ 0.1
UPK1AO00322 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.69■□□□□ 0.1
UPK1AO00322 UNC93B6-202ENST00000528242 690 ntBASIC15.69■□□□□ 0.1
UPK1AO00322 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.69■□□□□ 0.1
UPK1AO00322 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.69■□□□□ 0.1
UPK1AO00322 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms