Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 LINC00982-205ENST00000420957 435 ntBASIC11.67□□□□□ -0.54
LINC01546A6NGU7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC11.67□□□□□ -0.54
LINC01546A6NGU7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 AC092597.1-201ENST00000487352 616 ntBASIC11.67□□□□□ -0.54
LINC01546A6NGU7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 NAPSB-206ENST00000562112 1266 ntBASIC11.67□□□□□ -0.54
LINC01546A6NGU7 AC091167.2-201ENST00000579581 588 ntBASIC11.67□□□□□ -0.54
LINC01546A6NGU7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 AL031432.5-201ENST00000641059 760 ntBASIC11.67□□□□□ -0.54
LINC01546A6NGU7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 HLA-L-209ENST00000420110 1011 ntBASIC11.66□□□□□ -0.54
LINC01546A6NGU7 AL845331.1-201ENST00000424978 1190 ntBASIC11.66□□□□□ -0.54
LINC01546A6NGU7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 AL023973.1-201ENST00000624619 620 ntBASIC11.66□□□□□ -0.54
LINC01546A6NGU7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 C18orf15-201ENST00000623680 2534 ntBASIC11.66□□□□□ -0.54
LINC01546A6NGU7 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 KRT8P44-201ENST00000441609 1350 ntBASIC11.66□□□□□ -0.54
LINC01546A6NGU7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC01546A6NGU7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms