Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 AC093726.1-201ENST00000608064 963 ntBASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 AC020765.3-201ENST00000613051 740 ntBASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 AL391256.1-201ENST00000443260 1855 ntBASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
HCFC2Q9Y5Z7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.14■□□□□ 0.34
HCFC2Q9Y5Z7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
HCFC2Q9Y5Z7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
HCFC2Q9Y5Z7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC2Q9Y5Z7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC2Q9Y5Z7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.14■□□□□ 0.33
HCFC2Q9Y5Z7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
HCFC2Q9Y5Z7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HCFC2Q9Y5Z7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC2Q9Y5Z7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.14■□□□□ 0.33
HCFC2Q9Y5Z7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC2Q9Y5Z7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC2Q9Y5Z7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.14■□□□□ 0.33
HCFC2Q9Y5Z7 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.14■□□□□ 0.33
HCFC2Q9Y5Z7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC2Q9Y5Z7 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.14■□□□□ 0.33
HCFC2Q9Y5Z7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.14■□□□□ 0.33
HCFC2Q9Y5Z7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.14■□□□□ 0.33
HCFC2Q9Y5Z7 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.14■□□□□ 0.33
HCFC2Q9Y5Z7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HCFC2Q9Y5Z7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC2Q9Y5Z7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC2Q9Y5Z7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC2Q9Y5Z7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC2Q9Y5Z7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC2Q9Y5Z7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC2Q9Y5Z7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC2Q9Y5Z7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 AC141586.5-201ENST00000624546 2050 ntBASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 MIR4259-201ENST00000584466 101 ntBASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms