Protein–RNA interactions for Protein: Q9UPQ9

TNRC6B, Trinucleotide repeat-containing gene 6B protein, humanhuman

Known RBP Predictions only

Length 1,833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6BQ9UPQ9 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 GGT3P-204ENST00000453783 1664 ntBASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 AC060834.1-201ENST00000443027 2032 ntBASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 AL022328.1-201ENST00000610050 478 ntBASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TNRC6BQ9UPQ9 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 KRT43P-201ENST00000434019 910 ntBASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 DUX4L45-201ENST00000566406 1057 ntBASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 AC009542.2-202ENST00000619004 1067 ntBASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 AC020907.1-201ENST00000616460 1350 ntBASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.81■□□□□ 0.12
TNRC6BQ9UPQ9 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TNRC6BQ9UPQ9 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.8■□□□□ 0.12
TNRC6BQ9UPQ9 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.8■□□□□ 0.12
TNRC6BQ9UPQ9 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.8■□□□□ 0.12
TNRC6BQ9UPQ9 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.8■□□□□ 0.12
TNRC6BQ9UPQ9 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TNRC6BQ9UPQ9 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.8■□□□□ 0.12
TNRC6BQ9UPQ9 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.8■□□□□ 0.12
TNRC6BQ9UPQ9 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.8■□□□□ 0.12
TNRC6BQ9UPQ9 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TNRC6BQ9UPQ9 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.8■□□□□ 0.12
TNRC6BQ9UPQ9 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.8■□□□□ 0.12
TNRC6BQ9UPQ9 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TNRC6BQ9UPQ9 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.8■□□□□ 0.12
TNRC6BQ9UPQ9 MIR6869-201ENST00000619434 62 ntBASIC15.8■□□□□ 0.12
TNRC6BQ9UPQ9 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TNRC6BQ9UPQ9 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.8■□□□□ 0.12
TNRC6BQ9UPQ9 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TNRC6BQ9UPQ9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms