Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 TIMM8BP1-201ENST00000452384 211 ntBASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 AC079140.1-201ENST00000508039 487 ntBASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 AC105339.1-204ENST00000636249 355 ntBASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHA4Q9UN74 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 SPCS2P4-201ENST00000436160 681 ntBASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 AC073389.1-201ENST00000595595 795 ntBASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 AC008267.7-201ENST00000624570 1194 ntBASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHA4Q9UN74 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA4Q9UN74 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA4Q9UN74 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PCDHA4Q9UN74 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA4Q9UN74 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHA4Q9UN74 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA4Q9UN74 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA4Q9UN74 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHA4Q9UN74 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA4Q9UN74 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHA4Q9UN74 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
PCDHA4Q9UN74 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA4Q9UN74 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PCDHA4Q9UN74 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA4Q9UN74 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA4Q9UN74 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHA4Q9UN74 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHA4Q9UN74 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDHA4Q9UN74 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms