Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 KLK11-210ENST00000600362 759 ntTSL 3 BASIC25.64■■□□□ 1.7
RIMBP3Q9UFD9 AC007663.3-201ENST00000609632 465 ntBASIC25.64■■□□□ 1.7
RIMBP3Q9UFD9 CDK7-214ENST00000626796 358 ntTSL 5 BASIC25.64■■□□□ 1.7
RIMBP3Q9UFD9 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC25.64■■□□□ 1.7
RIMBP3Q9UFD9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC25.64■■□□□ 1.7
RIMBP3Q9UFD9 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RIMBP3Q9UFD9 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
RIMBP3Q9UFD9 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
RIMBP3Q9UFD9 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
RIMBP3Q9UFD9 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
RIMBP3Q9UFD9 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
RIMBP3Q9UFD9 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC25.64■■□□□ 1.69
RIMBP3Q9UFD9 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
RIMBP3Q9UFD9 TOMM22P5-201ENST00000416399 439 ntBASIC25.63■■□□□ 1.69
RIMBP3Q9UFD9 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
RIMBP3Q9UFD9 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC25.63■■□□□ 1.69
RIMBP3Q9UFD9 AC116345.2-201ENST00000512837 523 ntBASIC25.63■■□□□ 1.69
RIMBP3Q9UFD9 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
RIMBP3Q9UFD9 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC25.63■■□□□ 1.69
RIMBP3Q9UFD9 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC25.63■■□□□ 1.69
RIMBP3Q9UFD9 AC127024.7-201ENST00000625101 200 ntBASIC25.63■■□□□ 1.69
RIMBP3Q9UFD9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RIMBP3Q9UFD9 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
RIMBP3Q9UFD9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
RIMBP3Q9UFD9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC25.63■■□□□ 1.69
RIMBP3Q9UFD9 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RIMBP3Q9UFD9 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
RIMBP3Q9UFD9 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RIMBP3Q9UFD9 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC25.63■■□□□ 1.69
RIMBP3Q9UFD9 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC25.63■■□□□ 1.69
RIMBP3Q9UFD9 IFT20-206ENST00000578122 834 ntTSL 2 BASIC25.63■■□□□ 1.69
RIMBP3Q9UFD9 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC25.63■■□□□ 1.69
RIMBP3Q9UFD9 IFT20-208ENST00000578985 831 ntTSL 3 BASIC25.63■■□□□ 1.69
RIMBP3Q9UFD9 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC25.63■■□□□ 1.69
RIMBP3Q9UFD9 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RIMBP3Q9UFD9 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RIMBP3Q9UFD9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC25.62■■□□□ 1.69
RIMBP3Q9UFD9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
RIMBP3Q9UFD9 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC25.62■■□□□ 1.69
RIMBP3Q9UFD9 IGHV3-37-201ENST00000518544 340 ntBASIC25.62■■□□□ 1.69
RIMBP3Q9UFD9 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RIMBP3Q9UFD9 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC25.62■■□□□ 1.69
RIMBP3Q9UFD9 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RIMBP3Q9UFD9 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RIMBP3Q9UFD9 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RIMBP3Q9UFD9 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RIMBP3Q9UFD9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RIMBP3Q9UFD9 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC25.61■■□□□ 1.69
RIMBP3Q9UFD9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
RIMBP3Q9UFD9 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
RIMBP3Q9UFD9 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC25.61■■□□□ 1.69
RIMBP3Q9UFD9 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
RIMBP3Q9UFD9 SMS-201ENST00000379404 1174 ntTSL 3 BASIC25.61■■□□□ 1.69
RIMBP3Q9UFD9 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RIMBP3Q9UFD9 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC25.61■■□□□ 1.69
RIMBP3Q9UFD9 AC079178.1-201ENST00000420915 656 ntBASIC25.61■■□□□ 1.69
RIMBP3Q9UFD9 AL008707.1-201ENST00000422498 534 ntBASIC25.61■■□□□ 1.69
RIMBP3Q9UFD9 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC25.61■■□□□ 1.69
RIMBP3Q9UFD9 AC005730.2-201ENST00000564549 1184 ntBASIC25.61■■□□□ 1.69
RIMBP3Q9UFD9 GMFG-209ENST00000600322 622 ntTSL 5 BASIC25.61■■□□□ 1.69
RIMBP3Q9UFD9 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC25.61■■□□□ 1.69
RIMBP3Q9UFD9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RIMBP3Q9UFD9 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RIMBP3Q9UFD9 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RIMBP3Q9UFD9 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RIMBP3Q9UFD9 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RIMBP3Q9UFD9 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC25.6■■□□□ 1.69
RIMBP3Q9UFD9 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC25.6■■□□□ 1.69
RIMBP3Q9UFD9 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
RIMBP3Q9UFD9 TISP43-201ENST00000409793 538 ntTSL 4 BASIC25.6■■□□□ 1.69
RIMBP3Q9UFD9 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC25.6■■□□□ 1.69
RIMBP3Q9UFD9 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RIMBP3Q9UFD9 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RIMBP3Q9UFD9 AL161670.2-201ENST00000557650 1227 ntBASIC25.6■■□□□ 1.69
RIMBP3Q9UFD9 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC25.6■■□□□ 1.69
RIMBP3Q9UFD9 DIO1-215ENST00000610607 796 ntTSL 5 BASIC25.6■■□□□ 1.69
RIMBP3Q9UFD9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
RIMBP3Q9UFD9 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC25.6■■□□□ 1.69
RIMBP3Q9UFD9 GRN-214ENST00000589265 1632 ntTSL 5 BASIC25.6■■□□□ 1.69
RIMBP3Q9UFD9 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
RIMBP3Q9UFD9 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 AC103988.2-201ENST00000561804 725 ntBASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 SNX33P1-201ENST00000592116 1762 ntBASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC25.59■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms