Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 LINC02012-201ENST00000608206 1725 ntBASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 AC005229.1-201ENST00000392885 409 ntBASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 HIST3H2BA-201ENST00000436555 524 ntBASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 RN7SL399P-201ENST00000471648 279 ntBASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 MIR5189-201ENST00000577370 114 ntBASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CXXC1Q9P0U4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CXXC1Q9P0U4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CXXC1Q9P0U4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CXXC1Q9P0U4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CXXC1Q9P0U4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CXXC1Q9P0U4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CXXC1Q9P0U4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CXXC1Q9P0U4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CXXC1Q9P0U4 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CXXC1Q9P0U4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.54■□□□□ 0.4
CXXC1Q9P0U4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.54■□□□□ 0.4
CXXC1Q9P0U4 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CXXC1Q9P0U4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.54■□□□□ 0.4
CXXC1Q9P0U4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.54■□□□□ 0.4
CXXC1Q9P0U4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.54■□□□□ 0.4
CXXC1Q9P0U4 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CXXC1Q9P0U4 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.54■□□□□ 0.4
CXXC1Q9P0U4 RN7SL190P-201ENST00000582519 257 ntBASIC17.54■□□□□ 0.4
CXXC1Q9P0U4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.54■□□□□ 0.4
CXXC1Q9P0U4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CXXC1Q9P0U4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CXXC1Q9P0U4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.54■□□□□ 0.4
CXXC1Q9P0U4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CXXC1Q9P0U4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CXXC1Q9P0U4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CXXC1Q9P0U4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CXXC1Q9P0U4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 GOLGA2P4-201ENST00000441462 777 ntBASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 BCRP2-202ENST00000447763 634 ntBASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 BCRP6-201ENST00000510112 632 ntBASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 BCRP7-201ENST00000511549 544 ntBASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 AC124947.2-201ENST00000547118 1133 ntBASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 MIR3615-201ENST00000581999 87 ntBASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 KRT8P22-201ENST00000562317 1415 ntBASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CXXC1Q9P0U4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms