Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.37□□□□□ -0.11
TREM2Q9NZC2 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.37□□□□□ -0.11
TREM2Q9NZC2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 AC004967.1-201ENST00000453589 447 ntBASIC14.37□□□□□ -0.11
TREM2Q9NZC2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 CXCL1P1-201ENST00000502804 216 ntBASIC14.37□□□□□ -0.11
TREM2Q9NZC2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 AC134684.3-201ENST00000641758 218 ntBASIC14.37□□□□□ -0.11
TREM2Q9NZC2 AC079781.4-201ENST00000641908 219 ntBASIC14.37□□□□□ -0.11
TREM2Q9NZC2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 AC025580.3-201ENST00000617932 1424 ntBASIC14.37□□□□□ -0.11
TREM2Q9NZC2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TREM2Q9NZC2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 AC008741.2-201ENST00000612792 3115 ntBASIC14.36□□□□□ -0.11
TREM2Q9NZC2 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 MCCD1P2-201ENST00000423228 335 ntBASIC14.36□□□□□ -0.11
TREM2Q9NZC2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 AC005829.1-201ENST00000570002 483 ntBASIC14.36□□□□□ -0.11
TREM2Q9NZC2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TREM2Q9NZC2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms