Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 FOXO1B-201ENST00000504678 1527 ntBASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 AC093520.2-201ENST00000561830 333 ntBASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 AL596442.2-201ENST00000610240 980 ntBASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 GPALPP1-207ENST00000611650 899 ntBASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEM248Q9NWD8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 RPS8P6-201ENST00000426177 609 ntBASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 AC005237.2-201ENST00000434368 219 ntBASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 AP001160.2-201ENST00000596071 487 ntBASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 UXT-AS1-201ENST00000590504 1525 ntBASIC16.86■□□□□ 0.29
TMEM248Q9NWD8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM248Q9NWD8 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM248Q9NWD8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM248Q9NWD8 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM248Q9NWD8 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.85■□□□□ 0.29
TMEM248Q9NWD8 U82695.1-201ENST00000635752 1889 ntBASIC16.85■□□□□ 0.29
TMEM248Q9NWD8 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM248Q9NWD8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.85■□□□□ 0.29
TMEM248Q9NWD8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.85■□□□□ 0.29
TMEM248Q9NWD8 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.85■□□□□ 0.29
TMEM248Q9NWD8 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM248Q9NWD8 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM248Q9NWD8 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.85■□□□□ 0.29
TMEM248Q9NWD8 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.85■□□□□ 0.29
TMEM248Q9NWD8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM248Q9NWD8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TMEM248Q9NWD8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM248Q9NWD8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.85■□□□□ 0.29
TMEM248Q9NWD8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM248Q9NWD8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.85■□□□□ 0.29
TMEM248Q9NWD8 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM248Q9NWD8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms