Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC21.23■□□□□ 0.99
SMC4Q9NTJ3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMC4Q9NTJ3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC21.23■□□□□ 0.99
SMC4Q9NTJ3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SMC4Q9NTJ3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC21.23■□□□□ 0.99
SMC4Q9NTJ3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC21.23■□□□□ 0.99
SMC4Q9NTJ3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMC4Q9NTJ3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC21.23■□□□□ 0.99
SMC4Q9NTJ3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMC4Q9NTJ3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMC4Q9NTJ3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SMC4Q9NTJ3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SMC4Q9NTJ3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMC4Q9NTJ3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
SMC4Q9NTJ3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMC4Q9NTJ3 AC002056.1-201ENST00000395613 760 ntBASIC21.22■□□□□ 0.99
SMC4Q9NTJ3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMC4Q9NTJ3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC21.22■□□□□ 0.99
SMC4Q9NTJ3 AC112191.1-201ENST00000523689 701 ntBASIC21.22■□□□□ 0.99
SMC4Q9NTJ3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SMC4Q9NTJ3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SMC4Q9NTJ3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC21.22■□□□□ 0.99
SMC4Q9NTJ3 AL078644.1-201ENST00000609881 752 ntBASIC21.22■□□□□ 0.99
SMC4Q9NTJ3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC21.22■□□□□ 0.99
SMC4Q9NTJ3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMC4Q9NTJ3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC21.22■□□□□ 0.99
SMC4Q9NTJ3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMC4Q9NTJ3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMC4Q9NTJ3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMC4Q9NTJ3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMC4Q9NTJ3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC21.22■□□□□ 0.99
SMC4Q9NTJ3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMC4Q9NTJ3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 MCCD1P2-201ENST00000423228 335 ntBASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 AC004832.2-201ENST00000426397 482 ntBASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 FAM58CP-201ENST00000435741 640 ntBASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC21.21■□□□□ 0.99
SMC4Q9NTJ3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SMC4Q9NTJ3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
SMC4Q9NTJ3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC21.2■□□□□ 0.98
SMC4Q9NTJ3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMC4Q9NTJ3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMC4Q9NTJ3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SMC4Q9NTJ3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC21.2■□□□□ 0.98
SMC4Q9NTJ3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC21.2■□□□□ 0.98
SMC4Q9NTJ3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMC4Q9NTJ3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMC4Q9NTJ3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMC4Q9NTJ3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC21.2■□□□□ 0.98
SMC4Q9NTJ3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMC4Q9NTJ3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMC4Q9NTJ3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC21.2■□□□□ 0.98
SMC4Q9NTJ3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SMC4Q9NTJ3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC21.2■□□□□ 0.98
SMC4Q9NTJ3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC21.2■□□□□ 0.98
SMC4Q9NTJ3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC21.2■□□□□ 0.98
SMC4Q9NTJ3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.2■□□□□ 0.98
SMC4Q9NTJ3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC21.2■□□□□ 0.98
SMC4Q9NTJ3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMC4Q9NTJ3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMC4Q9NTJ3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMC4Q9NTJ3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SMC4Q9NTJ3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMC4Q9NTJ3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SMC4Q9NTJ3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SMC4Q9NTJ3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMC4Q9NTJ3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
SMC4Q9NTJ3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms