Protein–RNA interactions for Protein: Q9NT99

LRRC4B, Leucine-rich repeat-containing protein 4B, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4BQ9NT99 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
LRRC4BQ9NT99 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC4BQ9NT99 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC4BQ9NT99 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC4BQ9NT99 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC4BQ9NT99 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC4BQ9NT99 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC20.67■□□□□ 0.9
LRRC4BQ9NT99 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC4BQ9NT99 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC20.67■□□□□ 0.9
LRRC4BQ9NT99 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC20.67■□□□□ 0.9
LRRC4BQ9NT99 RPL13P2-201ENST00000440687 659 ntBASIC20.67■□□□□ 0.9
LRRC4BQ9NT99 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC20.67■□□□□ 0.9
LRRC4BQ9NT99 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC20.67■□□□□ 0.9
LRRC4BQ9NT99 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC20.67■□□□□ 0.9
LRRC4BQ9NT99 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC20.67■□□□□ 0.9
LRRC4BQ9NT99 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC4BQ9NT99 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LRRC4BQ9NT99 AL118558.3-201ENST00000607414 1079 ntBASIC20.67■□□□□ 0.9
LRRC4BQ9NT99 AC244669.2-201ENST00000612320 853 ntBASIC20.67■□□□□ 0.9
LRRC4BQ9NT99 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC4BQ9NT99 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC4BQ9NT99 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
LRRC4BQ9NT99 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC20.67■□□□□ 0.9
LRRC4BQ9NT99 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC4BQ9NT99 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC4BQ9NT99 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC4BQ9NT99 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
LRRC4BQ9NT99 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 YBX1P6-201ENST00000442962 1002 ntBASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 PTP4A1P2-201ENST00000546033 454 ntBASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 AC124283.3-201ENST00000570869 594 ntBASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 RN7SL560P-201ENST00000577943 264 ntBASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 RNF165-205ENST00000588679 2904 ntBASIC20.66■□□□□ 0.9
LRRC4BQ9NT99 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 AC106872.11-201ENST00000605838 421 ntBASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 AC091271.1-201ENST00000611877 1162 ntBASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC4BQ9NT99 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms