Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 FAM45BP-202ENST00000592932 1624 ntBASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 RCN1P2-201ENST00000398357 915 ntBASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 LINC00265-3P-201ENST00000447588 903 ntBASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 TOB2P1-201ENST00000469761 992 ntBASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 TPSP2-201ENST00000561760 610 ntBASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 AP005901.3-202ENST00000581653 237 ntBASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 AC092329.2-201ENST00000598402 547 ntBASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB16Q9NRJ7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 AL391256.1-201ENST00000443260 1855 ntBASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 CYP2T1P-202ENST00000641596 2535 ntBASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 ABCD1P5-201ENST00000445663 754 ntBASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 AC091607.1-201ENST00000490318 1060 ntBASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 AP002414.4-201ENST00000589764 1148 ntBASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 BNIP3P18-201ENST00000593976 575 ntBASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHB16Q9NRJ7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms