Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VTA1Q9NP79 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
VTA1Q9NP79 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
VTA1Q9NP79 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
VTA1Q9NP79 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VTA1Q9NP79 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
VTA1Q9NP79 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
VTA1Q9NP79 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VTA1Q9NP79 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VTA1Q9NP79 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.38■□□□□ 0.53
VTA1Q9NP79 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.38■□□□□ 0.53
VTA1Q9NP79 AC098614.1-201ENST00000368528 745 ntBASIC18.38■□□□□ 0.53
VTA1Q9NP79 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VTA1Q9NP79 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VTA1Q9NP79 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
VTA1Q9NP79 AL139010.1-201ENST00000454878 894 ntBASIC18.38■□□□□ 0.53
VTA1Q9NP79 AC093004.1-201ENST00000508850 424 ntBASIC18.38■□□□□ 0.53
VTA1Q9NP79 DOC2GP-202ENST00000514950 1163 ntBASIC18.38■□□□□ 0.53
VTA1Q9NP79 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.38■□□□□ 0.53
VTA1Q9NP79 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
VTA1Q9NP79 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.38■□□□□ 0.53
VTA1Q9NP79 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.38■□□□□ 0.53
VTA1Q9NP79 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VTA1Q9NP79 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VTA1Q9NP79 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
VTA1Q9NP79 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.38■□□□□ 0.53
VTA1Q9NP79 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VTA1Q9NP79 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VTA1Q9NP79 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.38■□□□□ 0.53
VTA1Q9NP79 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.38■□□□□ 0.53
VTA1Q9NP79 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VTA1Q9NP79 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
VTA1Q9NP79 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
VTA1Q9NP79 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.38■□□□□ 0.53
VTA1Q9NP79 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VTA1Q9NP79 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VTA1Q9NP79 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VTA1Q9NP79 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.37■□□□□ 0.53
VTA1Q9NP79 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
VTA1Q9NP79 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VTA1Q9NP79 OR8S1-201ENST00000310194 1080 ntBASIC18.37■□□□□ 0.53
VTA1Q9NP79 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.37■□□□□ 0.53
VTA1Q9NP79 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VTA1Q9NP79 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.37■□□□□ 0.53
VTA1Q9NP79 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.37■□□□□ 0.53
VTA1Q9NP79 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.37■□□□□ 0.53
VTA1Q9NP79 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VTA1Q9NP79 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.37■□□□□ 0.53
VTA1Q9NP79 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.37■□□□□ 0.53
VTA1Q9NP79 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.37■□□□□ 0.53
VTA1Q9NP79 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.37■□□□□ 0.53
VTA1Q9NP79 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.37■□□□□ 0.53
VTA1Q9NP79 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.37■□□□□ 0.53
VTA1Q9NP79 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.37■□□□□ 0.53
VTA1Q9NP79 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
VTA1Q9NP79 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VTA1Q9NP79 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VTA1Q9NP79 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
VTA1Q9NP79 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.37■□□□□ 0.53
VTA1Q9NP79 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VTA1Q9NP79 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.37■□□□□ 0.53
VTA1Q9NP79 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.36■□□□□ 0.53
VTA1Q9NP79 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VTA1Q9NP79 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
VTA1Q9NP79 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VTA1Q9NP79 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VTA1Q9NP79 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
VTA1Q9NP79 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
VTA1Q9NP79 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
VTA1Q9NP79 SPDYE19P-201ENST00000338590 713 ntBASIC18.36■□□□□ 0.53
VTA1Q9NP79 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VTA1Q9NP79 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VTA1Q9NP79 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VTA1Q9NP79 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
VTA1Q9NP79 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
VTA1Q9NP79 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.36■□□□□ 0.53
VTA1Q9NP79 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VTA1Q9NP79 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VTA1Q9NP79 MEIS3P1-201ENST00000495167 958 ntBASIC18.36■□□□□ 0.53
VTA1Q9NP79 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.36■□□□□ 0.53
VTA1Q9NP79 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VTA1Q9NP79 SDHAP3-202ENST00000515467 728 ntBASIC18.36■□□□□ 0.53
VTA1Q9NP79 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VTA1Q9NP79 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.36■□□□□ 0.53
VTA1Q9NP79 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
VTA1Q9NP79 AC138969.3-201ENST00000546612 1459 ntBASIC18.36■□□□□ 0.53
VTA1Q9NP79 AC138932.2-201ENST00000548268 1459 ntBASIC18.36■□□□□ 0.53
VTA1Q9NP79 AC126755.4-201ENST00000549796 1459 ntBASIC18.36■□□□□ 0.53
VTA1Q9NP79 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VTA1Q9NP79 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VTA1Q9NP79 AL603756.1-201ENST00000606511 2163 ntBASIC18.36■□□□□ 0.53
VTA1Q9NP79 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.36■□□□□ 0.53
VTA1Q9NP79 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
VTA1Q9NP79 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
VTA1Q9NP79 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
VTA1Q9NP79 AC139713.2-201ENST00000641328 2723 ntBASIC18.36■□□□□ 0.53
VTA1Q9NP79 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.35■□□□□ 0.53
VTA1Q9NP79 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VTA1Q9NP79 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.35■□□□□ 0.53
VTA1Q9NP79 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms