Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 HBZP1-201ENST00000354915 429 ntBASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 FAM220CP-201ENST00000395253 831 ntBASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 STK19B-204ENST00000512515 211 ntBASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 AC125634.1-201ENST00000438758 1403 ntBASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 AC009336.1-201ENST00000608941 1553 ntBASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SND1-IT1Q9HBX3 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 GUSBP12-201ENST00000513727 720 ntBASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 AC010203.1-204ENST00000548782 407 ntBASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC11.15□□□□□ -0.62
SND1-IT1Q9HBX3 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
SND1-IT1Q9HBX3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
SND1-IT1Q9HBX3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC11.15□□□□□ -0.63
SND1-IT1Q9HBX3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
SND1-IT1Q9HBX3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
SND1-IT1Q9HBX3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.63
SND1-IT1Q9HBX3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC11.15□□□□□ -0.63
SND1-IT1Q9HBX3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC11.15□□□□□ -0.63
SND1-IT1Q9HBX3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.63
SND1-IT1Q9HBX3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.63
SND1-IT1Q9HBX3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
SND1-IT1Q9HBX3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
SND1-IT1Q9HBX3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 LINC02228-204ENST00000642115 2962 ntBASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 AL603832.2-201ENST00000566195 2125 ntBASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms