Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 AL365203.3-201ENST00000609742 2057 ntBASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 RNA5SP415-201ENST00000517246 115 ntBASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 UNC93B6-202ENST00000528242 690 ntBASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 Z83851.2-201ENST00000609564 659 ntBASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 PI4KAP1-204ENST00000612579 1703 ntBASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLK4Q9HAZ1 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 ZNF259P1-201ENST00000407656 1365 ntBASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 MRPL20P1-201ENST00000400819 433 ntBASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms