Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM6Q9C030 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRIM6Q9C030 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM6Q9C030 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM6Q9C030 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM6Q9C030 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM6Q9C030 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM6Q9C030 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM6Q9C030 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRIM6Q9C030 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRIM6Q9C030 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.21■□□□□ 0.51
TRIM6Q9C030 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.21■□□□□ 0.51
TRIM6Q9C030 AC009093.7-201ENST00000623853 1223 ntBASIC18.21■□□□□ 0.51
TRIM6Q9C030 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM6Q9C030 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM6Q9C030 UXT-AS1-201ENST00000590504 1525 ntBASIC18.21■□□□□ 0.51
TRIM6Q9C030 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM6Q9C030 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM6Q9C030 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM6Q9C030 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM6Q9C030 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM6Q9C030 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM6Q9C030 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRIM6Q9C030 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
TRIM6Q9C030 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM6Q9C030 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM6Q9C030 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM6Q9C030 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM6Q9C030 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM6Q9C030 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM6Q9C030 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM6Q9C030 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM6Q9C030 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM6Q9C030 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM6Q9C030 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM6Q9C030 AC016027.1-202ENST00000607927 1699 ntBASIC18.2■□□□□ 0.5
TRIM6Q9C030 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM6Q9C030 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM6Q9C030 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM6Q9C030 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM6Q9C030 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 SPCS2P4-201ENST00000436160 681 ntBASIC18.2■□□□□ 0.5
TRIM6Q9C030 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM6Q9C030 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM6Q9C030 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 CYMP-203ENST00000474680 1263 ntBASIC18.2■□□□□ 0.5
TRIM6Q9C030 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 HLA-J-203ENST00000494367 1087 ntBASIC18.2■□□□□ 0.5
TRIM6Q9C030 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM6Q9C030 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM6Q9C030 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 AC093520.2-201ENST00000561830 333 ntBASIC18.2■□□□□ 0.5
TRIM6Q9C030 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM6Q9C030 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM6Q9C030 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM6Q9C030 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM6Q9C030 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM6Q9C030 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM6Q9C030 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM6Q9C030 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM6Q9C030 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM6Q9C030 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TRIM6Q9C030 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRIM6Q9C030 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TRIM6Q9C030 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM6Q9C030 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM6Q9C030 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM6Q9C030 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRIM6Q9C030 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
TRIM6Q9C030 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM6Q9C030 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM6Q9C030 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM6Q9C030 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM6Q9C030 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.19■□□□□ 0.5
TRIM6Q9C030 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms