Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 LINC01568-207ENST00000641790 1380 ntBASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 TSPY15P-201ENST00000457163 923 ntBASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 AC111152.3-201ENST00000569699 673 ntBASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 GPR89P-201ENST00000407924 1495 ntBASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP4Q9BWG4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SSBP4Q9BWG4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC12.58□□□□□ -0.39
SSBP4Q9BWG4 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
SSBP4Q9BWG4 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
SSBP4Q9BWG4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
SSBP4Q9BWG4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SSBP4Q9BWG4 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
SSBP4Q9BWG4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 FUT8-AS1-201ENST00000621019 1521 ntBASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 SBF1P1-201ENST00000444527 5631 ntBASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 SPDYE15P-201ENST00000424157 909 ntBASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 AC092473.1-201ENST00000441098 221 ntBASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 STK25P1-201ENST00000585406 838 ntBASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms