Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 THTPA-206ENST00000556015 535 ntTSL 3 BASIC11.59□□□□□ -0.55
UPK3BQ9BT76 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
UPK3BQ9BT76 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC11.59□□□□□ -0.55
UPK3BQ9BT76 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC11.59□□□□□ -0.55
UPK3BQ9BT76 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC11.59□□□□□ -0.55
UPK3BQ9BT76 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC11.59□□□□□ -0.55
UPK3BQ9BT76 AL691403.2-201ENST00000618460 490 ntBASIC11.59□□□□□ -0.55
UPK3BQ9BT76 CITED2-204ENST00000618718 901 ntTSL 2 BASIC11.59□□□□□ -0.55
UPK3BQ9BT76 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC11.59□□□□□ -0.55
UPK3BQ9BT76 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC11.59□□□□□ -0.55
UPK3BQ9BT76 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC11.59□□□□□ -0.55
UPK3BQ9BT76 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
UPK3BQ9BT76 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
UPK3BQ9BT76 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
UPK3BQ9BT76 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UPK3BQ9BT76 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UPK3BQ9BT76 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UPK3BQ9BT76 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UPK3BQ9BT76 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
UPK3BQ9BT76 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC11.59□□□□□ -0.55
UPK3BQ9BT76 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC11.59□□□□□ -0.55
UPK3BQ9BT76 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UPK3BQ9BT76 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
UPK3BQ9BT76 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
UPK3BQ9BT76 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
UPK3BQ9BT76 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
UPK3BQ9BT76 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
UPK3BQ9BT76 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
UPK3BQ9BT76 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 FOS-208ENST00000555686 1496 ntTSL 2 BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 PGR-209ENST00000617858 2816 ntTSL 5 BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 AC002056.1-201ENST00000395613 760 ntBASIC11.58□□□□□ -0.56
UPK3BQ9BT76 AC254562.1-201ENST00000417586 456 ntBASIC11.58□□□□□ -0.56
UPK3BQ9BT76 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 ALG1L5P-201ENST00000482043 771 ntBASIC11.58□□□□□ -0.56
UPK3BQ9BT76 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 AP001350.2-201ENST00000625104 1094 ntBASIC11.58□□□□□ -0.56
UPK3BQ9BT76 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC11.58□□□□□ -0.56
UPK3BQ9BT76 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 LINC02012-201ENST00000608206 1725 ntBASIC11.57□□□□□ -0.56
UPK3BQ9BT76 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms