Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HERPUD2Q9BSE4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HERPUD2Q9BSE4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
HERPUD2Q9BSE4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HERPUD2Q9BSE4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HERPUD2Q9BSE4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HERPUD2Q9BSE4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
HERPUD2Q9BSE4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 AC112504.1-201ENST00000623415 1841 ntBASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 CDC14C-201ENST00000428251 1719 ntBASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 AC012569.1-201ENST00000591191 1524 ntBASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HERPUD2Q9BSE4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
HERPUD2Q9BSE4 HYMAI-201ENST00000635591 3347 ntBASIC17.14■□□□□ 0.34
HERPUD2Q9BSE4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
HERPUD2Q9BSE4 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 AC092910.1-201ENST00000482027 1129 ntBASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 AC005593.1-201ENST00000624894 515 ntBASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 AP001350.2-201ENST00000625104 1094 ntBASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HERPUD2Q9BSE4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 RNU1-129P-201ENST00000384064 167 ntBASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 U1.21-201ENST00000580816 167 ntBASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 IL9RP2-201ENST00000423948 1312 ntBASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERPUD2Q9BSE4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms