Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SEMA3CQ99985 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEMA3CQ99985 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEMA3CQ99985 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SEMA3CQ99985 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.79■□□□□ 0.28
SEMA3CQ99985 AL662844.4-201ENST00000606367 2838 ntBASIC16.79■□□□□ 0.28
SEMA3CQ99985 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
SEMA3CQ99985 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEMA3CQ99985 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SEMA3CQ99985 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEMA3CQ99985 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SEMA3CQ99985 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SEMA3CQ99985 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.79■□□□□ 0.28
SEMA3CQ99985 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.79■□□□□ 0.28
SEMA3CQ99985 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEMA3CQ99985 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEMA3CQ99985 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEMA3CQ99985 WASH6P-202ENST00000359512 1437 ntBASIC16.79■□□□□ 0.28
SEMA3CQ99985 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEMA3CQ99985 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.79■□□□□ 0.28
SEMA3CQ99985 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
SEMA3CQ99985 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEMA3CQ99985 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.78■□□□□ 0.28
SEMA3CQ99985 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SEMA3CQ99985 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEMA3CQ99985 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SEMA3CQ99985 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SEMA3CQ99985 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SEMA3CQ99985 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SEMA3CQ99985 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEMA3CQ99985 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SEMA3CQ99985 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.78■□□□□ 0.28
SEMA3CQ99985 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.78■□□□□ 0.28
SEMA3CQ99985 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
SEMA3CQ99985 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SEMA3CQ99985 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SEMA3CQ99985 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.78■□□□□ 0.28
SEMA3CQ99985 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEMA3CQ99985 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.78■□□□□ 0.28
SEMA3CQ99985 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SEMA3CQ99985 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SEMA3CQ99985 HTR5BP-201ENST00000430851 1154 ntBASIC16.78■□□□□ 0.28
SEMA3CQ99985 KRT18P34-201ENST00000488218 1270 ntBASIC16.78■□□□□ 0.28
SEMA3CQ99985 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.78■□□□□ 0.28
SEMA3CQ99985 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.78■□□□□ 0.28
SEMA3CQ99985 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SEMA3CQ99985 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SEMA3CQ99985 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SEMA3CQ99985 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.78■□□□□ 0.28
SEMA3CQ99985 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEMA3CQ99985 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEMA3CQ99985 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SEMA3CQ99985 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SEMA3CQ99985 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SEMA3CQ99985 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SEMA3CQ99985 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SEMA3CQ99985 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SEMA3CQ99985 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEMA3CQ99985 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEMA3CQ99985 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.78■□□□□ 0.28
SEMA3CQ99985 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEMA3CQ99985 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEMA3CQ99985 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.77■□□□□ 0.28
SEMA3CQ99985 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SEMA3CQ99985 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.77■□□□□ 0.28
SEMA3CQ99985 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SEMA3CQ99985 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SEMA3CQ99985 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.77■□□□□ 0.28
SEMA3CQ99985 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEMA3CQ99985 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SEMA3CQ99985 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEMA3CQ99985 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEMA3CQ99985 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.77■□□□□ 0.28
SEMA3CQ99985 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEMA3CQ99985 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
SEMA3CQ99985 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEMA3CQ99985 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEMA3CQ99985 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.77■□□□□ 0.28
SEMA3CQ99985 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SEMA3CQ99985 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEMA3CQ99985 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.77■□□□□ 0.28
SEMA3CQ99985 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SEMA3CQ99985 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
SEMA3CQ99985 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEMA3CQ99985 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SEMA3CQ99985 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.77■□□□□ 0.28
SEMA3CQ99985 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.77■□□□□ 0.28
SEMA3CQ99985 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.77■□□□□ 0.28
SEMA3CQ99985 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEMA3CQ99985 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.77■□□□□ 0.28
SEMA3CQ99985 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.77■□□□□ 0.28
SEMA3CQ99985 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SEMA3CQ99985 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.77■□□□□ 0.28
SEMA3CQ99985 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
SEMA3CQ99985 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.77■□□□□ 0.28
SEMA3CQ99985 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.77■□□□□ 0.28
SEMA3CQ99985 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEMA3CQ99985 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SEMA3CQ99985 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SEMA3CQ99985 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms