Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.3■□□□□ 0.36
SMOQ99835 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.3■□□□□ 0.36
SMOQ99835 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMOQ99835 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.3■□□□□ 0.36
SMOQ99835 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.3■□□□□ 0.36
SMOQ99835 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
SMOQ99835 AC008677.1-201ENST00000519230 1561 ntBASIC17.3■□□□□ 0.36
SMOQ99835 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMOQ99835 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMOQ99835 AL589702.1-201ENST00000641229 1509 ntBASIC17.3■□□□□ 0.36
SMOQ99835 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMOQ99835 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMOQ99835 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.3■□□□□ 0.36
SMOQ99835 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMOQ99835 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.3■□□□□ 0.36
SMOQ99835 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMOQ99835 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMOQ99835 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMOQ99835 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SMOQ99835 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMOQ99835 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SMOQ99835 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SMOQ99835 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMOQ99835 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMOQ99835 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMOQ99835 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMOQ99835 FAM220BP-201ENST00000377689 816 ntBASIC17.29■□□□□ 0.36
SMOQ99835 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.29■□□□□ 0.36
SMOQ99835 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMOQ99835 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMOQ99835 AC015911.4-201ENST00000588022 1070 ntBASIC17.29■□□□□ 0.36
SMOQ99835 AC106028.4-201ENST00000614509 607 ntBASIC17.29■□□□□ 0.36
SMOQ99835 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.29■□□□□ 0.36
SMOQ99835 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
SMOQ99835 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.29■□□□□ 0.36
SMOQ99835 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMOQ99835 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.29■□□□□ 0.36
SMOQ99835 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SMOQ99835 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.29■□□□□ 0.36
SMOQ99835 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMOQ99835 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SMOQ99835 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.29■□□□□ 0.36
SMOQ99835 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMOQ99835 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SMOQ99835 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMOQ99835 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMOQ99835 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMOQ99835 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMOQ99835 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMOQ99835 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SMOQ99835 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.28■□□□□ 0.36
SMOQ99835 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMOQ99835 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.28■□□□□ 0.36
SMOQ99835 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SMOQ99835 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
SMOQ99835 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMOQ99835 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMOQ99835 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMOQ99835 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.28■□□□□ 0.36
SMOQ99835 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.28■□□□□ 0.36
SMOQ99835 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.28■□□□□ 0.36
SMOQ99835 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMOQ99835 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMOQ99835 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMOQ99835 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMOQ99835 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMOQ99835 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMOQ99835 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMOQ99835 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.28■□□□□ 0.36
SMOQ99835 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.28■□□□□ 0.36
SMOQ99835 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.28■□□□□ 0.36
SMOQ99835 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.28■□□□□ 0.36
SMOQ99835 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMOQ99835 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMOQ99835 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMOQ99835 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMOQ99835 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMOQ99835 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.28■□□□□ 0.36
SMOQ99835 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SMOQ99835 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMOQ99835 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SMOQ99835 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMOQ99835 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMOQ99835 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMOQ99835 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
SMOQ99835 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMOQ99835 ME2P1-201ENST00000426028 1970 ntBASIC17.28■□□□□ 0.36
SMOQ99835 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMOQ99835 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMOQ99835 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.28■□□□□ 0.36
SMOQ99835 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMOQ99835 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMOQ99835 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMOQ99835 PCDHA14-201ENST00000506751 2298 ntBASIC17.27■□□□□ 0.36
SMOQ99835 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.27■□□□□ 0.36
SMOQ99835 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.27■□□□□ 0.36
SMOQ99835 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMOQ99835 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.27■□□□□ 0.36
SMOQ99835 HLA-H-201ENST00000383620 1096 ntBASIC17.27■□□□□ 0.36
SMOQ99835 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms