Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS2Q99743 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.28■□□□□ 0.2
NPAS2Q99743 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NPAS2Q99743 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS2Q99743 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NPAS2Q99743 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.28■□□□□ 0.2
NPAS2Q99743 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.28■□□□□ 0.2
NPAS2Q99743 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS2Q99743 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS2Q99743 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS2Q99743 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NPAS2Q99743 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.28■□□□□ 0.2
NPAS2Q99743 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS2Q99743 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
NPAS2Q99743 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
NPAS2Q99743 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
NPAS2Q99743 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.28■□□□□ 0.2
NPAS2Q99743 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.28■□□□□ 0.2
NPAS2Q99743 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NPAS2Q99743 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS2Q99743 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.28■□□□□ 0.2
NPAS2Q99743 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS2Q99743 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.28■□□□□ 0.2
NPAS2Q99743 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.28■□□□□ 0.2
NPAS2Q99743 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.28■□□□□ 0.2
NPAS2Q99743 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.28■□□□□ 0.2
NPAS2Q99743 AC139887.3-201ENST00000568585 713 ntBASIC16.28■□□□□ 0.2
NPAS2Q99743 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS2Q99743 MTDHP4-201ENST00000600287 670 ntBASIC16.28■□□□□ 0.2
NPAS2Q99743 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS2Q99743 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.28■□□□□ 0.2
NPAS2Q99743 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.28■□□□□ 0.2
NPAS2Q99743 AC073592.4-201ENST00000623827 446 ntBASIC16.28■□□□□ 0.2
NPAS2Q99743 AC116407.3-201ENST00000623905 1129 ntBASIC16.28■□□□□ 0.2
NPAS2Q99743 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS2Q99743 AC006538.1-201ENST00000567905 1585 ntBASIC16.28■□□□□ 0.2
NPAS2Q99743 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS2Q99743 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
NPAS2Q99743 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
NPAS2Q99743 AC132938.5-201ENST00000624980 1813 ntBASIC16.28■□□□□ 0.2
NPAS2Q99743 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS2Q99743 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS2Q99743 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.27■□□□□ 0.2
NPAS2Q99743 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS2Q99743 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS2Q99743 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.27■□□□□ 0.2
NPAS2Q99743 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS2Q99743 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS2Q99743 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
NPAS2Q99743 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.27■□□□□ 0.2
NPAS2Q99743 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
NPAS2Q99743 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS2Q99743 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS2Q99743 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS2Q99743 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
NPAS2Q99743 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS2Q99743 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS2Q99743 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.27■□□□□ 0.2
NPAS2Q99743 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
NPAS2Q99743 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.27■□□□□ 0.2
NPAS2Q99743 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS2Q99743 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.27■□□□□ 0.2
NPAS2Q99743 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.27■□□□□ 0.2
NPAS2Q99743 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.27■□□□□ 0.2
NPAS2Q99743 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
NPAS2Q99743 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.27■□□□□ 0.2
NPAS2Q99743 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
NPAS2Q99743 AC073592.5-201ENST00000624854 528 ntBASIC16.27■□□□□ 0.2
NPAS2Q99743 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS2Q99743 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NPAS2Q99743 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.27■□□□□ 0.19
NPAS2Q99743 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NPAS2Q99743 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.27■□□□□ 0.19
NPAS2Q99743 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NPAS2Q99743 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NPAS2Q99743 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.27■□□□□ 0.19
NPAS2Q99743 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NPAS2Q99743 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NPAS2Q99743 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NPAS2Q99743 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NPAS2Q99743 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.26■□□□□ 0.19
NPAS2Q99743 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NPAS2Q99743 AC144831.1-201ENST00000573312 2656 ntBASIC16.26■□□□□ 0.19
NPAS2Q99743 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.26■□□□□ 0.19
NPAS2Q99743 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.26■□□□□ 0.19
NPAS2Q99743 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.26■□□□□ 0.19
NPAS2Q99743 SPDYE21P-201ENST00000413323 827 ntBASIC16.26■□□□□ 0.19
NPAS2Q99743 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NPAS2Q99743 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms