Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LITAFQ99732 MARS-233ENST00000628866 2583 ntTSL 5 BASIC11.04□□□□□ -0.64
LITAFQ99732 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LITAFQ99732 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LITAFQ99732 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
LITAFQ99732 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
LITAFQ99732 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC11.04□□□□□ -0.64
LITAFQ99732 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC11.04□□□□□ -0.64
LITAFQ99732 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
LITAFQ99732 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 GPAA1P2-202ENST00000606848 1787 ntBASIC11.03□□□□□ -0.64
LITAFQ99732 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
LITAFQ99732 KRT8P39-201ENST00000396270 1433 ntBASIC11.03□□□□□ -0.64
LITAFQ99732 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
LITAFQ99732 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC11.03□□□□□ -0.64
LITAFQ99732 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
LITAFQ99732 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC11.03□□□□□ -0.64
LITAFQ99732 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC11.03□□□□□ -0.64
LITAFQ99732 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
LITAFQ99732 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
LITAFQ99732 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC11.03□□□□□ -0.64
LITAFQ99732 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC11.03□□□□□ -0.64
LITAFQ99732 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
LITAFQ99732 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC11.03□□□□□ -0.64
LITAFQ99732 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 AP001412.1-201ENST00000608405 714 ntBASIC11.03□□□□□ -0.64
LITAFQ99732 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
LITAFQ99732 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 PC-214ENST00000628663 1470 ntTSL 5 BASIC11.03□□□□□ -0.64
LITAFQ99732 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
LITAFQ99732 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC11.03□□□□□ -0.64
LITAFQ99732 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC11.03□□□□□ -0.64
LITAFQ99732 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC11.03□□□□□ -0.64
LITAFQ99732 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
LITAFQ99732 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
LITAFQ99732 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
LITAFQ99732 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC11.03□□□□□ -0.64
LITAFQ99732 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC11.03□□□□□ -0.64
LITAFQ99732 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC11.03□□□□□ -0.64
LITAFQ99732 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
LITAFQ99732 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC11.03□□□□□ -0.64
LITAFQ99732 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
LITAFQ99732 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC11.03□□□□□ -0.64
LITAFQ99732 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
LITAFQ99732 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LITAFQ99732 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
LITAFQ99732 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
LITAFQ99732 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
LITAFQ99732 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LITAFQ99732 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC11.02□□□□□ -0.64
LITAFQ99732 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
LITAFQ99732 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC11.02□□□□□ -0.64
LITAFQ99732 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LITAFQ99732 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC11.02□□□□□ -0.64
LITAFQ99732 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
LITAFQ99732 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
LITAFQ99732 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC11.02□□□□□ -0.64
LITAFQ99732 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC11.02□□□□□ -0.64
LITAFQ99732 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LITAFQ99732 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LITAFQ99732 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC11.02□□□□□ -0.65
LITAFQ99732 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC11.02□□□□□ -0.65
LITAFQ99732 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LITAFQ99732 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LITAFQ99732 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms