Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 HTR5BP-201ENST00000430851 1154 ntBASIC13.88□□□□□ -0.19
CCL13Q99616 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.88□□□□□ -0.19
CCL13Q99616 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCL13Q99616 ALG1L5P-201ENST00000482043 771 ntBASIC13.88□□□□□ -0.19
CCL13Q99616 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CCL13Q99616 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.88□□□□□ -0.19
CCL13Q99616 AC109635.5-201ENST00000533593 962 ntBASIC13.88□□□□□ -0.19
CCL13Q99616 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.88□□□□□ -0.19
CCL13Q99616 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
CCL13Q99616 MIR3909-201ENST00000579518 119 ntBASIC13.88□□□□□ -0.19
CCL13Q99616 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.88□□□□□ -0.19
CCL13Q99616 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.88□□□□□ -0.19
CCL13Q99616 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.88□□□□□ -0.19
CCL13Q99616 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCL13Q99616 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CCL13Q99616 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL13Q99616 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL13Q99616 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL13Q99616 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.88□□□□□ -0.19
CCL13Q99616 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
CCL13Q99616 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.88□□□□□ -0.19
CCL13Q99616 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL13Q99616 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.88□□□□□ -0.19
CCL13Q99616 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.88□□□□□ -0.19
CCL13Q99616 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL13Q99616 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL13Q99616 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CCL13Q99616 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL13Q99616 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCL13Q99616 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CCL13Q99616 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL13Q99616 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CCL13Q99616 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL13Q99616 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL13Q99616 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.87□□□□□ -0.19
CCL13Q99616 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL13Q99616 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL13Q99616 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL13Q99616 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CCL13Q99616 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
CCL13Q99616 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.87□□□□□ -0.19
CCL13Q99616 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL13Q99616 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL13Q99616 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.87□□□□□ -0.19
CCL13Q99616 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CCL13Q99616 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL13Q99616 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.87□□□□□ -0.19
CCL13Q99616 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.87□□□□□ -0.19
CCL13Q99616 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL13Q99616 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.87□□□□□ -0.19
CCL13Q99616 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.87□□□□□ -0.19
CCL13Q99616 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL13Q99616 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.87□□□□□ -0.19
CCL13Q99616 AC112482.1-201ENST00000492080 688 ntBASIC13.87□□□□□ -0.19
CCL13Q99616 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL13Q99616 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.87□□□□□ -0.19
CCL13Q99616 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL13Q99616 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CCL13Q99616 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.87□□□□□ -0.19
CCL13Q99616 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.87□□□□□ -0.19
CCL13Q99616 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL13Q99616 AC005829.1-201ENST00000570002 483 ntBASIC13.87□□□□□ -0.19
CCL13Q99616 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL13Q99616 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL13Q99616 AL161645.1-201ENST00000622716 1255 ntBASIC13.87□□□□□ -0.19
CCL13Q99616 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.87□□□□□ -0.19
CCL13Q99616 AC092902.6-201ENST00000641783 218 ntBASIC13.87□□□□□ -0.19
CCL13Q99616 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL13Q99616 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL13Q99616 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL13Q99616 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL13Q99616 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL13Q99616 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL13Q99616 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CCL13Q99616 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CCL13Q99616 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL13Q99616 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL13Q99616 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL13Q99616 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL13Q99616 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL13Q99616 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL13Q99616 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL13Q99616 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.87□□□□□ -0.19
CCL13Q99616 GGT4P-201ENST00000623672 1708 ntBASIC13.87□□□□□ -0.19
CCL13Q99616 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL13Q99616 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.86□□□□□ -0.19
CCL13Q99616 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.86□□□□□ -0.19
CCL13Q99616 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL13Q99616 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL13Q99616 GPAA1P2-202ENST00000606848 1787 ntBASIC13.86□□□□□ -0.19
CCL13Q99616 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL13Q99616 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL13Q99616 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL13Q99616 ALOX12P2-203ENST00000570921 1945 ntBASIC13.86□□□□□ -0.19
CCL13Q99616 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CCL13Q99616 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CCL13Q99616 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL13Q99616 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL13Q99616 AC016027.1-202ENST00000607927 1699 ntBASIC13.86□□□□□ -0.19
CCL13Q99616 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms