Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC092865.6-201ENST00000642101 219 ntBASIC19.6■□□□□ 0.73
NEK1Q96PY6 AC092919.2-201ENST00000623631 1645 ntBASIC19.6■□□□□ 0.73
NEK1Q96PY6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.6■□□□□ 0.73
NEK1Q96PY6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEK1Q96PY6 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NEK1Q96PY6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
NEK1Q96PY6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.6■□□□□ 0.73
NEK1Q96PY6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEK1Q96PY6 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEK1Q96PY6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NEK1Q96PY6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.6■□□□□ 0.73
NEK1Q96PY6 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEK1Q96PY6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEK1Q96PY6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
NEK1Q96PY6 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
NEK1Q96PY6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NEK1Q96PY6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NEK1Q96PY6 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.59■□□□□ 0.73
NEK1Q96PY6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEK1Q96PY6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEK1Q96PY6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.59■□□□□ 0.73
NEK1Q96PY6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
NEK1Q96PY6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEK1Q96PY6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEK1Q96PY6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEK1Q96PY6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
NEK1Q96PY6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NEK1Q96PY6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEK1Q96PY6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.59■□□□□ 0.73
NEK1Q96PY6 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEK1Q96PY6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEK1Q96PY6 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.59■□□□□ 0.73
NEK1Q96PY6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.59■□□□□ 0.73
NEK1Q96PY6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.59■□□□□ 0.73
NEK1Q96PY6 AC074386.1-202ENST00000463561 864 ntBASIC19.59■□□□□ 0.73
NEK1Q96PY6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
NEK1Q96PY6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.59■□□□□ 0.73
NEK1Q96PY6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEK1Q96PY6 PDPK2P-202ENST00000562415 1191 ntBASIC19.59■□□□□ 0.73
NEK1Q96PY6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
NEK1Q96PY6 AL671883.3-201ENST00000603274 991 ntBASIC19.59■□□□□ 0.73
NEK1Q96PY6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NEK1Q96PY6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEK1Q96PY6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
NEK1Q96PY6 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NEK1Q96PY6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEK1Q96PY6 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.59■□□□□ 0.73
NEK1Q96PY6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEK1Q96PY6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.59■□□□□ 0.73
NEK1Q96PY6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
NEK1Q96PY6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.59■□□□□ 0.73
NEK1Q96PY6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
NEK1Q96PY6 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NEK1Q96PY6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
NEK1Q96PY6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.58■□□□□ 0.73
NEK1Q96PY6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.58■□□□□ 0.73
NEK1Q96PY6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NEK1Q96PY6 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NEK1Q96PY6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
NEK1Q96PY6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.58■□□□□ 0.73
NEK1Q96PY6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
NEK1Q96PY6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NEK1Q96PY6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
NEK1Q96PY6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NEK1Q96PY6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NEK1Q96PY6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
NEK1Q96PY6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.58■□□□□ 0.72
NEK1Q96PY6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.58■□□□□ 0.72
NEK1Q96PY6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
NEK1Q96PY6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.58■□□□□ 0.72
NEK1Q96PY6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
NEK1Q96PY6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.58■□□□□ 0.72
NEK1Q96PY6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NEK1Q96PY6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NEK1Q96PY6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.58■□□□□ 0.72
NEK1Q96PY6 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.58■□□□□ 0.72
NEK1Q96PY6 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.58■□□□□ 0.72
NEK1Q96PY6 AC139530.3-201ENST00000620344 690 ntBASIC19.58■□□□□ 0.72
NEK1Q96PY6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.72
NEK1Q96PY6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.58■□□□□ 0.72
NEK1Q96PY6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NEK1Q96PY6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NEK1Q96PY6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
NEK1Q96PY6 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
NEK1Q96PY6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NEK1Q96PY6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NEK1Q96PY6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
NEK1Q96PY6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.58■□□□□ 0.72
NEK1Q96PY6 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
NEK1Q96PY6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NEK1Q96PY6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
NEK1Q96PY6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NEK1Q96PY6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
NEK1Q96PY6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NEK1Q96PY6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NEK1Q96PY6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NEK1Q96PY6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.57■□□□□ 0.72
NEK1Q96PY6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.57■□□□□ 0.72
NEK1Q96PY6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.57■□□□□ 0.72
NEK1Q96PY6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms