Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MS4A4EQ96PG1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MS4A4EQ96PG1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MS4A4EQ96PG1 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MS4A4EQ96PG1 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MS4A4EQ96PG1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.47■□□□□ 0.07
MS4A4EQ96PG1 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MS4A4EQ96PG1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.47■□□□□ 0.07
MS4A4EQ96PG1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MS4A4EQ96PG1 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.47■□□□□ 0.07
MS4A4EQ96PG1 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.47■□□□□ 0.07
MS4A4EQ96PG1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.47■□□□□ 0.07
MS4A4EQ96PG1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.47■□□□□ 0.07
MS4A4EQ96PG1 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 RPL13AP23-201ENST00000480739 586 ntBASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.46■□□□□ 0.07
MS4A4EQ96PG1 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
MS4A4EQ96PG1 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
MS4A4EQ96PG1 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
MS4A4EQ96PG1 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
MS4A4EQ96PG1 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.46■□□□□ 0.06
MS4A4EQ96PG1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
MS4A4EQ96PG1 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
MS4A4EQ96PG1 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.46■□□□□ 0.06
MS4A4EQ96PG1 PCDH8P1-201ENST00000428983 2773 ntBASIC15.46■□□□□ 0.06
MS4A4EQ96PG1 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
MS4A4EQ96PG1 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
MS4A4EQ96PG1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
MS4A4EQ96PG1 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 AL590627.1-203ENST00000421194 1026 ntBASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 AC109635.5-201ENST00000533593 962 ntBASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MS4A4EQ96PG1 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms