Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 MRPS18AP1-201ENST00000414458 589 ntBASIC19.19■□□□□ 0.66
CCDC17Q96LX7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 COX20P2-201ENST00000452636 358 ntBASIC19.19■□□□□ 0.66
CCDC17Q96LX7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 AL079307.3-201ENST00000556114 283 ntBASIC19.19■□□□□ 0.66
CCDC17Q96LX7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 LINC02560-201ENST00000596379 459 ntBASIC19.19■□□□□ 0.66
CCDC17Q96LX7 AC008761.3-201ENST00000624803 892 ntBASIC19.19■□□□□ 0.66
CCDC17Q96LX7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 U82695.1-201ENST00000635752 1889 ntBASIC19.19■□□□□ 0.66
CCDC17Q96LX7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 AC022144.1-201ENST00000602255 1580 ntBASIC19.19■□□□□ 0.66
CCDC17Q96LX7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC17Q96LX7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC17Q96LX7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC17Q96LX7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC17Q96LX7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC17Q96LX7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC17Q96LX7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC17Q96LX7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC17Q96LX7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC17Q96LX7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC17Q96LX7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC17Q96LX7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC17Q96LX7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC17Q96LX7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC17Q96LX7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.18■□□□□ 0.66
CCDC17Q96LX7 AL365330.1-201ENST00000607459 531 ntBASIC19.18■□□□□ 0.66
CCDC17Q96LX7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC17Q96LX7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC17Q96LX7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC17Q96LX7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC17Q96LX7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC17Q96LX7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC17Q96LX7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC17Q96LX7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC17Q96LX7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC17Q96LX7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC17Q96LX7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC17Q96LX7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC17Q96LX7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC17Q96LX7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC17Q96LX7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC17Q96LX7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC17Q96LX7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC17Q96LX7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC17Q96LX7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC17Q96LX7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC17Q96LX7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CCDC17Q96LX7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC17Q96LX7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC17Q96LX7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC17Q96LX7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC17Q96LX7 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.17■□□□□ 0.66
CCDC17Q96LX7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC17Q96LX7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.17■□□□□ 0.66
CCDC17Q96LX7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC17Q96LX7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CCDC17Q96LX7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC17Q96LX7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCDC17Q96LX7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC17Q96LX7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC17Q96LX7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC17Q96LX7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC17Q96LX7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC17Q96LX7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms