Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CHMP6Q96FZ7 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 AC009336.1-201ENST00000608941 1553 ntBASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 KRT8P10-201ENST00000450021 1447 ntBASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 KRT18P38-201ENST00000449496 1282 ntBASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 RN7SL850P-201ENST00000579959 291 ntBASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 AC097637.2-201ENST00000624096 1997 ntBASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP6Q96FZ7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 AC122714.2-201ENST00000502787 707 ntBASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP6Q96FZ7 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 AC006486.2-201ENST00000624246 2199 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms