Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DDX11Q96FC9 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.68■□□□□ 0.74
DDX11Q96FC9 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.68■□□□□ 0.74
DDX11Q96FC9 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.68■□□□□ 0.74
DDX11Q96FC9 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
DDX11Q96FC9 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX11Q96FC9 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX11Q96FC9 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DDX11Q96FC9 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.68■□□□□ 0.74
DDX11Q96FC9 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
DDX11Q96FC9 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX11Q96FC9 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX11Q96FC9 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.68■□□□□ 0.74
DDX11Q96FC9 AL645939.2-201ENST00000427340 991 ntBASIC19.68■□□□□ 0.74
DDX11Q96FC9 FAM185BP-201ENST00000443595 716 ntBASIC19.68■□□□□ 0.74
DDX11Q96FC9 AL513480.1-201ENST00000451731 511 ntBASIC19.68■□□□□ 0.74
DDX11Q96FC9 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.68■□□□□ 0.74
DDX11Q96FC9 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DDX11Q96FC9 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.68■□□□□ 0.74
DDX11Q96FC9 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX11Q96FC9 LINC02199-201ENST00000506655 2702 ntBASIC19.68■□□□□ 0.74
DDX11Q96FC9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX11Q96FC9 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX11Q96FC9 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
DDX11Q96FC9 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX11Q96FC9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DDX11Q96FC9 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX11Q96FC9 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.68■□□□□ 0.74
DDX11Q96FC9 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DDX11Q96FC9 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX11Q96FC9 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX11Q96FC9 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDX11Q96FC9 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDX11Q96FC9 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
DDX11Q96FC9 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DDX11Q96FC9 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
DDX11Q96FC9 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDX11Q96FC9 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DDX11Q96FC9 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDX11Q96FC9 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.67■□□□□ 0.74
DDX11Q96FC9 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDX11Q96FC9 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.67■□□□□ 0.74
DDX11Q96FC9 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
DDX11Q96FC9 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DDX11Q96FC9 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDX11Q96FC9 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.67■□□□□ 0.74
DDX11Q96FC9 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDX11Q96FC9 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
DDX11Q96FC9 AC006277.1-201ENST00000624348 1610 ntBASIC19.67■□□□□ 0.74
DDX11Q96FC9 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
DDX11Q96FC9 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.67■□□□□ 0.74
DDX11Q96FC9 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.67■□□□□ 0.74
DDX11Q96FC9 SLC25A6P2-201ENST00000497974 877 ntBASIC19.67■□□□□ 0.74
DDX11Q96FC9 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.67■□□□□ 0.74
DDX11Q96FC9 RFPL4AP1-201ENST00000530883 850 ntBASIC19.67■□□□□ 0.74
DDX11Q96FC9 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.67■□□□□ 0.74
DDX11Q96FC9 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.67■□□□□ 0.74
DDX11Q96FC9 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.67■□□□□ 0.74
DDX11Q96FC9 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.67■□□□□ 0.74
DDX11Q96FC9 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.67■□□□□ 0.74
DDX11Q96FC9 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
DDX11Q96FC9 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.67■□□□□ 0.74
DDX11Q96FC9 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.67■□□□□ 0.74
DDX11Q96FC9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DDX11Q96FC9 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.67■□□□□ 0.74
DDX11Q96FC9 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDX11Q96FC9 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDX11Q96FC9 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.67■□□□□ 0.74
DDX11Q96FC9 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DDX11Q96FC9 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
DDX11Q96FC9 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDX11Q96FC9 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDX11Q96FC9 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.67■□□□□ 0.74
DDX11Q96FC9 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDX11Q96FC9 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
DDX11Q96FC9 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDX11Q96FC9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX11Q96FC9 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX11Q96FC9 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DDX11Q96FC9 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
DDX11Q96FC9 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX11Q96FC9 AC006449.5-201ENST00000610658 2098 ntBASIC19.66■□□□□ 0.74
DDX11Q96FC9 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DDX11Q96FC9 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX11Q96FC9 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX11Q96FC9 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX11Q96FC9 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX11Q96FC9 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX11Q96FC9 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
DDX11Q96FC9 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
DDX11Q96FC9 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX11Q96FC9 CYMP-203ENST00000474680 1263 ntBASIC19.66■□□□□ 0.74
DDX11Q96FC9 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DDX11Q96FC9 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.66■□□□□ 0.74
DDX11Q96FC9 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX11Q96FC9 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.66■□□□□ 0.74
DDX11Q96FC9 AC068137.2-201ENST00000605408 478 ntBASIC19.66■□□□□ 0.74
DDX11Q96FC9 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.66■□□□□ 0.74
DDX11Q96FC9 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
DDX11Q96FC9 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms