Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.44■□□□□ 0.22
SH3KBP1Q96B97 AP000344.2-201ENST00000512987 629 ntBASIC16.44■□□□□ 0.22
SH3KBP1Q96B97 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.44■□□□□ 0.22
SH3KBP1Q96B97 FAM86C2P-203ENST00000528684 1004 ntBASIC16.44■□□□□ 0.22
SH3KBP1Q96B97 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.44■□□□□ 0.22
SH3KBP1Q96B97 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.44■□□□□ 0.22
SH3KBP1Q96B97 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.44■□□□□ 0.22
SH3KBP1Q96B97 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.44■□□□□ 0.22
SH3KBP1Q96B97 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
SH3KBP1Q96B97 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.44■□□□□ 0.22
SH3KBP1Q96B97 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH3KBP1Q96B97 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.44■□□□□ 0.22
SH3KBP1Q96B97 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.44■□□□□ 0.22
SH3KBP1Q96B97 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SH3KBP1Q96B97 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH3KBP1Q96B97 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SH3KBP1Q96B97 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
SH3KBP1Q96B97 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SH3KBP1Q96B97 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SH3KBP1Q96B97 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
SH3KBP1Q96B97 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH3KBP1Q96B97 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH3KBP1Q96B97 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SH3KBP1Q96B97 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 TOP3BP1-201ENST00000420768 1380 ntBASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 AC091167.2-201ENST00000579581 588 ntBASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 AP001350.2-201ENST00000625104 1094 ntBASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 AC092902.6-201ENST00000641783 218 ntBASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 AC012569.1-201ENST00000591191 1524 ntBASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SH3KBP1Q96B97 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 FLJ38576-201ENST00000623820 2459 ntBASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 UBALD1-205ENST00000590891 2641 ntBASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms