Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 SLC25A6P4-201ENST00000586535 553 ntBASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RAB40AQ8WXH6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 AF186996.4-201ENST00000467186 377 ntBASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 AC009336.1-201ENST00000608941 1553 ntBASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40AQ8WXH6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 AL021920.2-201ENST00000624828 1351 ntBASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms