Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TRIM41Q8WV44 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC28.19■■■□□ 2.1
TRIM41Q8WV44 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TRIM41Q8WV44 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TRIM41Q8WV44 AC005915.1-201ENST00000624912 2018 ntBASIC28.19■■■□□ 2.1
TRIM41Q8WV44 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC28.19■■■□□ 2.1
TRIM41Q8WV44 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
TRIM41Q8WV44 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TRIM41Q8WV44 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TRIM41Q8WV44 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TRIM41Q8WV44 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
TRIM41Q8WV44 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
TRIM41Q8WV44 MFF-223ENST00000524634 647 ntTSL 2 BASIC28.18■■■□□ 2.1
TRIM41Q8WV44 CASP16P-204ENST00000635032 809 ntBASIC28.18■■■□□ 2.1
TRIM41Q8WV44 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TRIM41Q8WV44 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
TRIM41Q8WV44 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC28.18■■■□□ 2.1
TRIM41Q8WV44 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TRIM41Q8WV44 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC28.18■■■□□ 2.1
TRIM41Q8WV44 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
TRIM41Q8WV44 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TRIM41Q8WV44 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC28.18■■■□□ 2.1
TRIM41Q8WV44 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TRIM41Q8WV44 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TRIM41Q8WV44 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRIM41Q8WV44 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
TRIM41Q8WV44 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRIM41Q8WV44 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRIM41Q8WV44 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
TRIM41Q8WV44 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC28.17■■■□□ 2.1
TRIM41Q8WV44 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRIM41Q8WV44 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
TRIM41Q8WV44 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRIM41Q8WV44 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC28.17■■■□□ 2.1
TRIM41Q8WV44 FADS2-212ENST00000522639 360 ntTSL 5 BASIC28.17■■■□□ 2.1
TRIM41Q8WV44 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC28.17■■■□□ 2.1
TRIM41Q8WV44 FADS2-215ENST00000574708 385 ntTSL 3 BASIC28.17■■■□□ 2.1
TRIM41Q8WV44 MIR3615-201ENST00000581999 87 ntBASIC28.17■■■□□ 2.1
TRIM41Q8WV44 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRIM41Q8WV44 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC28.17■■■□□ 2.1
TRIM41Q8WV44 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
TRIM41Q8WV44 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRIM41Q8WV44 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
TRIM41Q8WV44 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRIM41Q8WV44 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC28.17■■■□□ 2.1
TRIM41Q8WV44 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC28.17■■■□□ 2.1
TRIM41Q8WV44 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC28.16■■■□□ 2.1
TRIM41Q8WV44 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC28.16■■■□□ 2.1
TRIM41Q8WV44 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TRIM41Q8WV44 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TRIM41Q8WV44 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
TRIM41Q8WV44 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
TRIM41Q8WV44 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC28.16■■■□□ 2.1
TRIM41Q8WV44 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC28.16■■■□□ 2.1
TRIM41Q8WV44 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC28.16■■■□□ 2.1
TRIM41Q8WV44 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC28.16■■■□□ 2.1
TRIM41Q8WV44 AC105020.1-201ENST00000435356 2205 ntBASIC28.16■■■□□ 2.1
TRIM41Q8WV44 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
TRIM41Q8WV44 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
TRIM41Q8WV44 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TRIM41Q8WV44 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC28.16■■■□□ 2.1
TRIM41Q8WV44 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TRIM41Q8WV44 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
TRIM41Q8WV44 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
TRIM41Q8WV44 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC28.15■■■□□ 2.1
TRIM41Q8WV44 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
TRIM41Q8WV44 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
TRIM41Q8WV44 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TRIM41Q8WV44 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
TRIM41Q8WV44 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
TRIM41Q8WV44 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC28.15■■■□□ 2.1
TRIM41Q8WV44 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC28.15■■■□□ 2.1
TRIM41Q8WV44 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC28.15■■■□□ 2.1
TRIM41Q8WV44 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
TRIM41Q8WV44 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC28.15■■■□□ 2.1
TRIM41Q8WV44 AC008735.3-201ENST00000596646 500 ntBASIC28.15■■■□□ 2.1
TRIM41Q8WV44 AC021097.1-201ENST00000607902 574 ntBASIC28.15■■■□□ 2.1
TRIM41Q8WV44 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TRIM41Q8WV44 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC28.15■■■□□ 2.1
TRIM41Q8WV44 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TRIM41Q8WV44 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TRIM41Q8WV44 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
TRIM41Q8WV44 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TRIM41Q8WV44 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
TRIM41Q8WV44 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC28.14■■■□□ 2.1
TRIM41Q8WV44 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC28.14■■■□□ 2.1
TRIM41Q8WV44 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC28.14■■■□□ 2.1
TRIM41Q8WV44 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC28.14■■■□□ 2.1
TRIM41Q8WV44 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TRIM41Q8WV44 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
TRIM41Q8WV44 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TRIM41Q8WV44 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC28.14■■■□□ 2.1
TRIM41Q8WV44 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC28.14■■■□□ 2.1
TRIM41Q8WV44 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
TRIM41Q8WV44 AC106872.11-201ENST00000605838 421 ntBASIC28.14■■■□□ 2.1
TRIM41Q8WV44 KRT8P39-201ENST00000396270 1433 ntBASIC28.14■■■□□ 2.1
TRIM41Q8WV44 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
TRIM41Q8WV44 AC080080.1-201ENST00000625121 2420 ntBASIC28.14■■■□□ 2.1
TRIM41Q8WV44 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
TRIM41Q8WV44 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms