Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF217Q8TC41 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF217Q8TC41 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF217Q8TC41 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.1■□□□□ 0.17
RNF217Q8TC41 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RNF217Q8TC41 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF217Q8TC41 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF217Q8TC41 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF217Q8TC41 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RNF217Q8TC41 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF217Q8TC41 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF217Q8TC41 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF217Q8TC41 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RNF217Q8TC41 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF217Q8TC41 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF217Q8TC41 AC073347.1-201ENST00000421633 2643 ntBASIC16.09■□□□□ 0.17
RNF217Q8TC41 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF217Q8TC41 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF217Q8TC41 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF217Q8TC41 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
RNF217Q8TC41 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF217Q8TC41 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RNF217Q8TC41 COL6A4P2-202ENST00000504443 2753 ntBASIC16.09■□□□□ 0.17
RNF217Q8TC41 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF217Q8TC41 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RNF217Q8TC41 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF217Q8TC41 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RNF217Q8TC41 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
RNF217Q8TC41 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.09■□□□□ 0.17
RNF217Q8TC41 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.09■□□□□ 0.17
RNF217Q8TC41 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
RNF217Q8TC41 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF217Q8TC41 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF217Q8TC41 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF217Q8TC41 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
RNF217Q8TC41 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF217Q8TC41 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RNF217Q8TC41 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF217Q8TC41 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF217Q8TC41 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF217Q8TC41 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF217Q8TC41 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF217Q8TC41 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF217Q8TC41 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF217Q8TC41 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF217Q8TC41 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF217Q8TC41 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF217Q8TC41 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF217Q8TC41 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF217Q8TC41 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RNF217Q8TC41 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF217Q8TC41 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF217Q8TC41 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RNF217Q8TC41 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF217Q8TC41 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
RNF217Q8TC41 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RNF217Q8TC41 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
RNF217Q8TC41 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RNF217Q8TC41 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.08■□□□□ 0.17
RNF217Q8TC41 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RNF217Q8TC41 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RNF217Q8TC41 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
RNF217Q8TC41 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.08■□□□□ 0.17
RNF217Q8TC41 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RNF217Q8TC41 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RNF217Q8TC41 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RNF217Q8TC41 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RNF217Q8TC41 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF217Q8TC41 AL161772.1-201ENST00000610494 4412 ntBASIC16.08■□□□□ 0.16
RNF217Q8TC41 AL513523.2-202ENST00000427283 2040 ntBASIC16.08■□□□□ 0.16
RNF217Q8TC41 AC006449.5-201ENST00000610658 2098 ntBASIC16.08■□□□□ 0.16
RNF217Q8TC41 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF217Q8TC41 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF217Q8TC41 SPDYE13P-201ENST00000445314 798 ntBASIC16.08■□□□□ 0.16
RNF217Q8TC41 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.08■□□□□ 0.16
RNF217Q8TC41 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF217Q8TC41 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RNF217Q8TC41 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.08■□□□□ 0.16
RNF217Q8TC41 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF217Q8TC41 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
RNF217Q8TC41 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF217Q8TC41 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.08■□□□□ 0.16
RNF217Q8TC41 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF217Q8TC41 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF217Q8TC41 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF217Q8TC41 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF217Q8TC41 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF217Q8TC41 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF217Q8TC41 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF217Q8TC41 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF217Q8TC41 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF217Q8TC41 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF217Q8TC41 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF217Q8TC41 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF217Q8TC41 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF217Q8TC41 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF217Q8TC41 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RNF217Q8TC41 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF217Q8TC41 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.08■□□□□ 0.16
RNF217Q8TC41 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms